Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC016911.1-201ENST00000613297 452 ntBASIC4.63□□□□□ -1.67
NIPAL3Q6P499 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.63□□□□□ -1.67
NIPAL3Q6P499 RPL23AP61-201ENST00000623642 466 ntBASIC4.63□□□□□ -1.67
NIPAL3Q6P499 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.63□□□□□ -1.67
NIPAL3Q6P499 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.63□□□□□ -1.67
NIPAL3Q6P499 AL731566.1-201ENST00000620490 1937 ntBASIC4.63□□□□□ -1.67
NIPAL3Q6P499 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NIPAL3Q6P499 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
NIPAL3Q6P499 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.63□□□□□ -1.67
NIPAL3Q6P499 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.63□□□□□ -1.67
NIPAL3Q6P499 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 AC011447.7-201ENST00000624228 1590 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 U3.2-201ENST00000362981 210 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 U3.3-201ENST00000362986 216 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 MIR223-201ENST00000385204 110 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 DUTP5-201ENST00000406790 469 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 RN7SKP126-201ENST00000411143 300 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 GTF3AP1-201ENST00000416942 1004 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 OR2AH1P-201ENST00000425717 928 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 AL139148.1-201ENST00000427122 680 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 AL606490.7-201ENST00000433136 191 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 AL353898.1-201ENST00000444055 238 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 RSL24D1P2-201ENST00000445584 366 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 AL627224.1-201ENST00000448334 444 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 AURKAPS1-201ENST00000451805 1212 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 RN7SL172P-201ENST00000460535 303 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 AC009127.1-201ENST00000467090 155 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 HIGD1AP14-201ENST00000507617 282 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 HMGB3P16-201ENST00000508037 287 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 FABP5P6-201ENST00000510588 409 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 HMGB1P47-201ENST00000511281 589 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 RN7SL435P-201ENST00000584418 282 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 AP004372.1-201ENST00000604842 844 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 AP005131.7-201ENST00000610087 611 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 AC090527.3-201ENST00000619041 548 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 PABPC1P6-201ENST00000445594 1829 ntBASIC4.62□□□□□ -1.67
NIPAL3Q6P499 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NIPAL3Q6P499 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
NIPAL3Q6P499 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.61□□□□□ -1.67
NIPAL3Q6P499 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.61□□□□□ -1.67
NIPAL3Q6P499 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
NIPAL3Q6P499 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NIPAL3Q6P499 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NIPAL3Q6P499 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NIPAL3Q6P499 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NIPAL3Q6P499 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NIPAL3Q6P499 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NIPAL3Q6P499 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NIPAL3Q6P499 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NIPAL3Q6P499 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.61□□□□□ -1.67
NIPAL3Q6P499 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NIPAL3Q6P499 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.61□□□□□ -1.67
NIPAL3Q6P499 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms