Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 AL445493.3-201ENST00000619568 477 ntBASIC5.56□□□□□ -1.52
SNX30Q5VWJ9 AP002505.2-201ENST00000623585 696 ntBASIC5.56□□□□□ -1.52
SNX30Q5VWJ9 AC106730.3-201ENST00000624568 641 ntBASIC5.56□□□□□ -1.52
SNX30Q5VWJ9 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX30Q5VWJ9 AL360270.2-201ENST00000562952 5985 ntBASIC5.56□□□□□ -1.52
SNX30Q5VWJ9 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.56□□□□□ -1.52
SNX30Q5VWJ9 AL138820.1-201ENST00000617901 5305 ntBASIC5.56□□□□□ -1.52
SNX30Q5VWJ9 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNX30Q5VWJ9 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNX30Q5VWJ9 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SNX30Q5VWJ9 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 SNORA58B-201ENST00000364259 136 ntBASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 U3.36-201ENST00000408418 213 ntBASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 TATDN1P1-201ENST00000414123 891 ntBASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 ELOCP3-201ENST00000439303 348 ntBASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 AL035551.1-201ENST00000446931 348 ntBASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 CYCSP53-201ENST00000455540 265 ntBASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 BX284632.1-201ENST00000478218 541 ntBASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 OR5M14P-201ENST00000506803 618 ntBASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 RNU6-513P-201ENST00000516104 104 ntBASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 NPM1P35-201ENST00000533043 868 ntBASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 OSBPL9P3-201ENST00000534523 595 ntBASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 AC024940.3-201ENST00000538551 316 ntBASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 AC044860.2-201ENST00000561005 179 ntBASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 AC011447.4-201ENST00000587562 111 ntBASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 SUMO2P14-201ENST00000604488 293 ntBASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 TAS2R6P-201ENST00000605022 826 ntBASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 AC110792.4-201ENST00000609843 298 ntBASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX30Q5VWJ9 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 PANDAR-201ENST00000629595 1506 ntBASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 RPL23P2-201ENST00000320371 421 ntBASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 RNU6-249P-201ENST00000363016 102 ntBASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 RNA5SP507-201ENST00000363603 121 ntBASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 HMGB1P10-201ENST00000395823 563 ntBASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 HSPA8P15-201ENST00000401676 786 ntBASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 GAPDHP58-201ENST00000438477 1006 ntBASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 PTMAP6-201ENST00000439110 327 ntBASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 AURKAPS1-201ENST00000451805 1212 ntBASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 AC104634.1-201ENST00000452720 462 ntBASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 RN7SL329P-201ENST00000467740 299 ntBASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 RWDD4P1-201ENST00000488019 565 ntBASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 AC245389.2-201ENST00000616023 576 ntBASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 AC242843.1-201ENST00000618702 573 ntBASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms