Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDH1Q08174 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDH1Q08174 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH1Q08174 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDH1Q08174 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH1Q08174 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDH1Q08174 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.54□□□□□ -1.36
PCDH1Q08174 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 AP000547.3-204ENST00000588548 2523 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 UGT2B27P-201ENST00000505092 1620 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDH1Q08174 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDH1Q08174 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDH1Q08174 YWHAZP6-201ENST00000399764 738 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 CALM2P3-201ENST00000400429 449 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 AL589647.1-201ENST00000402485 466 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDH1Q08174 MICG-208ENST00000416822 132 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 PPIAP23-201ENST00000420099 497 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 AC069157.1-201ENST00000421749 137 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDH1Q08174 AC239367.3-201ENST00000428996 814 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 AC073464.1-201ENST00000429823 534 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 AC108463.1-201ENST00000450258 347 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 OFD1P4Y-201ENST00000455273 1179 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 AC074386.1-201ENST00000476560 767 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 NENFP3-201ENST00000503735 313 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 SNX18P23-201ENST00000510867 677 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 MTCO1P30-201ENST00000515244 580 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDH1Q08174 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDH1Q08174 AC138832.1-201ENST00000522871 556 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDH1Q08174 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 GTF2IP11-201ENST00000526931 420 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDH1Q08174 AL109628.1-201ENST00000556877 366 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDH1Q08174 MIR4301-201ENST00000577203 66 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 MIR4428-201ENST00000584884 73 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 AC008752.3-201ENST00000588113 712 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDH1Q08174 AL590032.1-201ENST00000604920 252 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 AC008277.2-201ENST00000605196 797 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDH1Q08174 AP001506.1-201ENST00000615444 211 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 AC136475.10-201ENST00000620253 385 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 AC006453.3-201ENST00000635891 377 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 AC137056.2-201ENST00000624055 1958 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDH1Q08174 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDH1Q08174 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDH1Q08174 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
PCDH1Q08174 OFD1P17-201ENST00000437639 3018 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 ZNF37BP-203ENST00000452306 1352 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
PCDH1Q08174 OR2A3P-202ENST00000641249 1776 ntBASIC6.54□□□□□ -1.36
PCDH1Q08174 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDH1Q08174 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
PCDH1Q08174 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDH1Q08174 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.54□□□□□ -1.36
PCDH1Q08174 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDH1Q08174 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH1Q08174 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
PCDH1Q08174 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PCDH1Q08174 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDH1Q08174 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH1Q08174 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH1Q08174 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH1Q08174 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH1Q08174 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH1Q08174 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH1Q08174 OR4K15-201ENST00000305051 1216 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 RNU6-1090P-201ENST00000364065 94 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 SUGT1P1-201ENST00000379514 476 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PCDH1Q08174 RNA5SP474-201ENST00000391234 90 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDH1Q08174 RPL23AP4-201ENST00000427757 463 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms