Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 RN7SKP226-201ENST00000364912 300 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
SOX4Q06945 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
SOX4Q06945 MIR130B-202ENST00000385018 82 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 Y_RNA.582-201ENST00000391023 95 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 AL590002.1-201ENST00000406554 418 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.74□□□□□ -1.33
SOX4Q06945 RPL23AP39-201ENST00000415533 405 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 LINC01347-201ENST00000417964 355 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC6.74□□□□□ -1.33
SOX4Q06945 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.74□□□□□ -1.33
SOX4Q06945 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.74□□□□□ -1.33
SOX4Q06945 USP9YP8-201ENST00000441913 500 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 VN1R10P-201ENST00000447106 875 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 AC097463.1-201ENST00000447288 481 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 AC092967.1-201ENST00000449016 481 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 MGAT2P1-201ENST00000449718 797 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC6.74□□□□□ -1.33
SOX4Q06945 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.74□□□□□ -1.33
SOX4Q06945 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.74□□□□□ -1.33
SOX4Q06945 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SOX4Q06945 ARL4AP2-201ENST00000507378 601 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.74□□□□□ -1.33
SOX4Q06945 SNORA20.3-201ENST00000516880 132 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.74□□□□□ -1.33
SOX4Q06945 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC6.74□□□□□ -1.33
SOX4Q06945 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC6.74□□□□□ -1.33
SOX4Q06945 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SOX4Q06945 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SOX4Q06945 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.74□□□□□ -1.33
SOX4Q06945 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.74□□□□□ -1.33
SOX4Q06945 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.74□□□□□ -1.33
SOX4Q06945 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC6.74□□□□□ -1.33
SOX4Q06945 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.74□□□□□ -1.33
SOX4Q06945 AC009120.3-201ENST00000563335 499 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.74□□□□□ -1.33
SOX4Q06945 OR4K7P-201ENST00000580232 945 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.74□□□□□ -1.33
SOX4Q06945 AC079315.1-201ENST00000602952 623 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 AC090578.1-201ENST00000604955 591 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 AC104458.1-201ENST00000608243 463 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SOX4Q06945 MIR3688-2-201ENST00000636963 87 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.74□□□□□ -1.33
SOX4Q06945 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
SOX4Q06945 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.74□□□□□ -1.33
SOX4Q06945 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SOX4Q06945 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.74□□□□□ -1.33
SOX4Q06945 LYARP1-201ENST00000436977 1501 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SOX4Q06945 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SOX4Q06945 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SOX4Q06945 AL079343.1-201ENST00000572358 1771 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 AL157700.1-201ENST00000561973 1432 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 AC006213.6-201ENST00000623722 4179 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SOX4Q06945 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.74□□□□□ -1.33
SOX4Q06945 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SOX4Q06945 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SOX4Q06945 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SOX4Q06945 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
SOX4Q06945 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SOX4Q06945 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SOX4Q06945 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SOX4Q06945 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
SOX4Q06945 CYP2G2P-201ENST00000594920 1485 ntBASIC6.73□□□□□ -1.33
SOX4Q06945 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SOX4Q06945 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
SOX4Q06945 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SOX4Q06945 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SOX4Q06945 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
SOX4Q06945 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.73□□□□□ -1.33
SOX4Q06945 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
SOX4Q06945 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SOX4Q06945 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.73□□□□□ -1.33
SOX4Q06945 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
SOX4Q06945 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SOX4Q06945 OR9G4-201ENST00000302957 984 ntBASIC6.73□□□□□ -1.33
SOX4Q06945 COX6B1P3-201ENST00000312310 260 ntBASIC6.73□□□□□ -1.33
SOX4Q06945 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.73□□□□□ -1.33
SOX4Q06945 RNU5A-6P-201ENST00000384136 116 ntBASIC6.73□□□□□ -1.33
SOX4Q06945 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SOX4Q06945 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC6.73□□□□□ -1.33
SOX4Q06945 AC019050.1-201ENST00000418508 492 ntBASIC6.73□□□□□ -1.33
SOX4Q06945 AL139413.1-201ENST00000421309 217 ntBASIC6.73□□□□□ -1.33
SOX4Q06945 FO393419.3-201ENST00000428741 282 ntBASIC6.73□□□□□ -1.33
SOX4Q06945 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.73□□□□□ -1.33
SOX4Q06945 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.73□□□□□ -1.33
SOX4Q06945 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC6.73□□□□□ -1.33
SOX4Q06945 RPS10P18-201ENST00000442662 495 ntBASIC6.73□□□□□ -1.33
SOX4Q06945 MORF4-201ENST00000447135 971 ntBASIC6.73□□□□□ -1.33
SOX4Q06945 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC6.73□□□□□ -1.33
SOX4Q06945 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.73□□□□□ -1.33
SOX4Q06945 RPS3AP17-201ENST00000472594 777 ntBASIC6.73□□□□□ -1.33
SOX4Q06945 AC026254.2-201ENST00000475295 371 ntBASIC6.73□□□□□ -1.33
SOX4Q06945 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.73□□□□□ -1.33
SOX4Q06945 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.73□□□□□ -1.33
SOX4Q06945 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC6.73□□□□□ -1.33
SOX4Q06945 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.73□□□□□ -1.33
SOX4Q06945 SETP21-201ENST00000514799 892 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms