Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.34□□□□□ -1.55
TPM4P67936 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.34□□□□□ -1.55
TPM4P67936 AL591623.2-201ENST00000449978 222 ntBASIC5.34□□□□□ -1.55
TPM4P67936 RN7SL817P-201ENST00000480777 288 ntBASIC5.34□□□□□ -1.55
TPM4P67936 HMGN2P25-201ENST00000486956 268 ntBASIC5.34□□□□□ -1.55
TPM4P67936 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.34□□□□□ -1.55
TPM4P67936 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.34□□□□□ -1.55
TPM4P67936 BX510359.5-201ENST00000515651 304 ntBASIC5.34□□□□□ -1.55
TPM4P67936 OR4A46P-201ENST00000527255 933 ntBASIC5.34□□□□□ -1.55
TPM4P67936 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.34□□□□□ -1.55
TPM4P67936 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TPM4P67936 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TPM4P67936 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.34□□□□□ -1.55
TPM4P67936 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.34□□□□□ -1.55
TPM4P67936 AC008521.2-201ENST00000591021 259 ntBASIC5.34□□□□□ -1.55
TPM4P67936 AL359513.1-201ENST00000614364 557 ntBASIC5.34□□□□□ -1.55
TPM4P67936 AC126175.1-201ENST00000617041 758 ntBASIC5.34□□□□□ -1.55
TPM4P67936 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.34□□□□□ -1.55
TPM4P67936 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
TPM4P67936 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TPM4P67936 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
TPM4P67936 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.34□□□□□ -1.56
TPM4P67936 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.34□□□□□ -1.56
TPM4P67936 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
TPM4P67936 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TPM4P67936 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
TPM4P67936 OR14L1P-202ENST00000641545 3009 ntBASIC5.33□□□□□ -1.56
TPM4P67936 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TPM4P67936 OR56A4-201ENST00000330728 1209 ntBASIC5.33□□□□□ -1.56
TPM4P67936 CXADRP1-201ENST00000398098 1095 ntBASIC5.33□□□□□ -1.56
TPM4P67936 LAP3P1-201ENST00000403648 294 ntBASIC5.33□□□□□ -1.56
TPM4P67936 RNA5SP345-201ENST00000410646 108 ntBASIC5.33□□□□□ -1.56
TPM4P67936 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.33□□□□□ -1.56
TPM4P67936 AC004448.2-201ENST00000422360 586 ntBASIC5.33□□□□□ -1.56
TPM4P67936 RPS17P8-201ENST00000434525 335 ntBASIC5.33□□□□□ -1.56
TPM4P67936 SPRYD7P1-201ENST00000443861 570 ntBASIC5.33□□□□□ -1.56
TPM4P67936 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.33□□□□□ -1.56
TPM4P67936 AL137845.2-201ENST00000444292 988 ntBASIC5.33□□□□□ -1.56
TPM4P67936 NDUFA5P8-201ENST00000449019 346 ntBASIC5.33□□□□□ -1.56
TPM4P67936 OR2AO1P-201ENST00000476497 403 ntBASIC5.33□□□□□ -1.56
TPM4P67936 RPL7AP10-201ENST00000481016 791 ntBASIC5.33□□□□□ -1.56
TPM4P67936 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.33□□□□□ -1.56
TPM4P67936 RPS27AP18-201ENST00000515536 459 ntBASIC5.33□□□□□ -1.56
TPM4P67936 RNA5SP43-201ENST00000516559 110 ntBASIC5.33□□□□□ -1.56
TPM4P67936 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.33□□□□□ -1.56
TPM4P67936 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.33□□□□□ -1.56
TPM4P67936 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.33□□□□□ -1.56
TPM4P67936 AL049839.1-201ENST00000556151 657 ntBASIC5.33□□□□□ -1.56
TPM4P67936 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TPM4P67936 HMGB2P1-201ENST00000591146 634 ntBASIC5.33□□□□□ -1.56
TPM4P67936 AL121932.1-201ENST00000605542 214 ntBASIC5.33□□□□□ -1.56
TPM4P67936 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.33□□□□□ -1.56
TPM4P67936 AC010424.2-201ENST00000607594 443 ntBASIC5.33□□□□□ -1.56
TPM4P67936 CXADRP3-202ENST00000617265 1100 ntBASIC5.33□□□□□ -1.56
TPM4P67936 AL357153.4-201ENST00000620487 1016 ntBASIC5.33□□□□□ -1.56
TPM4P67936 AL359757.1-201ENST00000623176 255 ntBASIC5.33□□□□□ -1.56
TPM4P67936 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TPM4P67936 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.33□□□□□ -1.56
TPM4P67936 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TPM4P67936 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TPM4P67936 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TPM4P67936 AL606537.1-201ENST00000607258 2011 ntBASIC5.33□□□□□ -1.56
TPM4P67936 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TPM4P67936 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TPM4P67936 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
TPM4P67936 SMG1P6-201ENST00000532337 2930 ntBASIC5.32□□□□□ -1.56
TPM4P67936 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TPM4P67936 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
TPM4P67936 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.32□□□□□ -1.56
TPM4P67936 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.32□□□□□ -1.56
TPM4P67936 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TPM4P67936 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TPM4P67936 OR56B2P-201ENST00000317102 954 ntBASIC5.32□□□□□ -1.56
TPM4P67936 RNA5SP183-201ENST00000362452 119 ntBASIC5.32□□□□□ -1.56
TPM4P67936 BMS1P3-201ENST00000372011 932 ntBASIC5.32□□□□□ -1.56
TPM4P67936 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TPM4P67936 RN7SKP59-201ENST00000410520 314 ntBASIC5.32□□□□□ -1.56
TPM4P67936 AF186996.5-201ENST00000418098 904 ntBASIC5.32□□□□□ -1.56
TPM4P67936 VN1R3-201ENST00000418822 919 ntBASIC5.32□□□□□ -1.56
TPM4P67936 PDSS1P1-201ENST00000422953 1114 ntBASIC5.32□□□□□ -1.56
TPM4P67936 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.32□□□□□ -1.56
TPM4P67936 SNRPFP2-201ENST00000440710 251 ntBASIC5.32□□□□□ -1.56
TPM4P67936 AC239798.3-201ENST00000454459 408 ntBASIC5.32□□□□□ -1.56
TPM4P67936 RN7SL319P-201ENST00000480656 221 ntBASIC5.32□□□□□ -1.56
TPM4P67936 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.32□□□□□ -1.56
TPM4P67936 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.32□□□□□ -1.56
TPM4P67936 AC018552.1-201ENST00000562099 811 ntBASIC5.32□□□□□ -1.56
TPM4P67936 AL139041.1-201ENST00000605480 610 ntBASIC5.32□□□□□ -1.56
TPM4P67936 AC091979.2-201ENST00000607514 214 ntBASIC5.32□□□□□ -1.56
TPM4P67936 AC079395.2-201ENST00000610982 737 ntBASIC5.32□□□□□ -1.56
TPM4P67936 AL356752.1-201ENST00000615844 593 ntBASIC5.32□□□□□ -1.56
TPM4P67936 AP002505.2-201ENST00000623585 696 ntBASIC5.32□□□□□ -1.56
TPM4P67936 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.32□□□□□ -1.56
TPM4P67936 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.32□□□□□ -1.56
TPM4P67936 AC138627.1-204ENST00000641894 765 ntBASIC5.32□□□□□ -1.56
TPM4P67936 CASC19-264ENST00000641912 1184 ntBASIC5.32□□□□□ -1.56
TPM4P67936 HSPD1P14-201ENST00000432666 1618 ntBASIC5.32□□□□□ -1.56
TPM4P67936 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TPM4P67936 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TPM4P67936 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms