Protein–RNA interactions for Protein: P63316

TNNC1, Troponin C, slow skeletal and cardiac muscles, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNC1P63316 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.29□□□□□ -1.56
TNNC1P63316 NEAT1-202ENST00000501122 22743 ntBASIC5.29□□□□□ -1.56
TNNC1P63316 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
TNNC1P63316 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.29□□□□□ -1.56
TNNC1P63316 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TNNC1P63316 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TNNC1P63316 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.28□□□□□ -1.56
TNNC1P63316 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TNNC1P63316 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.28□□□□□ -1.56
TNNC1P63316 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
TNNC1P63316 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.28□□□□□ -1.56
TNNC1P63316 SALL4P2-201ENST00000423288 2910 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TNNC1P63316 IRF5P1-201ENST00000504852 2164 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TNNC1P63316 MIR550A3-201ENST00000390735 95 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 SETP15-201ENST00000412724 337 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.28□□□□□ -1.56
TNNC1P63316 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.28□□□□□ -1.56
TNNC1P63316 QRSL1P2-201ENST00000418582 964 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 RPL12P43-201ENST00000420608 499 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 CKS1BP6-201ENST00000424932 240 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 AC093414.1-201ENST00000434712 514 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 PA2G4P6-201ENST00000438325 1197 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 MTND6P5-201ENST00000448266 512 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 SLC25A18P1-201ENST00000449385 454 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 AL445433.1-201ENST00000457507 257 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TNNC1P63316 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.28□□□□□ -1.56
TNNC1P63316 AC021006.3-201ENST00000530771 192 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.28□□□□□ -1.56
TNNC1P63316 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.28□□□□□ -1.56
TNNC1P63316 AC125612.1-201ENST00000547580 377 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TNNC1P63316 MIR3934-201ENST00000579806 107 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 RNF138P2-201ENST00000603490 592 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 AC104687.2-201ENST00000604442 342 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 AC087783.2-201ENST00000605070 562 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 AC005084.1-201ENST00000605160 304 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 AF117829.2-201ENST00000619538 361 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 AL445528.2-201ENST00000620582 470 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 AC243960.7-201ENST00000623532 707 ntBASIC5.28□□□□□ -1.56
TNNC1P63316 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.28□□□□□ -1.56
TNNC1P63316 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
TNNC1P63316 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
TNNC1P63316 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TNNC1P63316 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TNNC1P63316 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TNNC1P63316 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TNNC1P63316 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.27□□□□□ -1.57
TNNC1P63316 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TNNC1P63316 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNNC1P63316 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNNC1P63316 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.27□□□□□ -1.57
TNNC1P63316 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNNC1P63316 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNNC1P63316 RNU6-249P-201ENST00000363016 102 ntBASIC5.27□□□□□ -1.57
TNNC1P63316 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TNNC1P63316 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TNNC1P63316 AC007068.1-201ENST00000396690 844 ntBASIC5.27□□□□□ -1.57
TNNC1P63316 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
TNNC1P63316 GTF2IP5-201ENST00000414608 731 ntBASIC5.27□□□□□ -1.57
TNNC1P63316 TBCAP2-201ENST00000416175 326 ntBASIC5.27□□□□□ -1.57
TNNC1P63316 AL590762.4-201ENST00000425885 253 ntBASIC5.27□□□□□ -1.57
TNNC1P63316 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.27□□□□□ -1.57
TNNC1P63316 FABP7P2-201ENST00000429946 379 ntBASIC5.27□□□□□ -1.57
TNNC1P63316 NMNAT1P2-201ENST00000435192 860 ntBASIC5.27□□□□□ -1.57
TNNC1P63316 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.27□□□□□ -1.57
TNNC1P63316 RHEBP2-201ENST00000450289 600 ntBASIC5.27□□□□□ -1.57
TNNC1P63316 OTX2P1-201ENST00000450956 354 ntBASIC5.27□□□□□ -1.57
TNNC1P63316 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.27□□□□□ -1.57
TNNC1P63316 AC104849.1-201ENST00000462623 405 ntBASIC5.27□□□□□ -1.57
TNNC1P63316 RPL7P16-201ENST00000479738 738 ntBASIC5.27□□□□□ -1.57
TNNC1P63316 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.27□□□□□ -1.57
TNNC1P63316 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.27□□□□□ -1.57
TNNC1P63316 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.27□□□□□ -1.57
TNNC1P63316 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.27□□□□□ -1.57
TNNC1P63316 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.27□□□□□ -1.57
TNNC1P63316 MIR4443-201ENST00000585052 53 ntBASIC5.27□□□□□ -1.57
TNNC1P63316 AC087385.3-201ENST00000620477 187 ntBASIC5.27□□□□□ -1.57
TNNC1P63316 AC010809.3-201ENST00000621310 641 ntBASIC5.27□□□□□ -1.57
TNNC1P63316 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.27□□□□□ -1.57
TNNC1P63316 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.27□□□□□ -1.57
TNNC1P63316 CASC19-206ENST00000641028 1430 ntBASIC5.27□□□□□ -1.57
TNNC1P63316 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TNNC1P63316 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNNC1P63316 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.27□□□□□ -1.57
TNNC1P63316 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNNC1P63316 LINC01355-201ENST00000566551 5444 ntBASIC5.26□□□□□ -1.57
TNNC1P63316 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
TNNC1P63316 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.26□□□□□ -1.57
TNNC1P63316 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.26□□□□□ -1.57
TNNC1P63316 AL133268.1-201ENST00000405676 1401 ntBASIC5.26□□□□□ -1.57
TNNC1P63316 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.26□□□□□ -1.57
TNNC1P63316 AC092111.2-201ENST00000611627 1414 ntBASIC5.26□□□□□ -1.57
TNNC1P63316 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNNC1P63316 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TNNC1P63316 HMGB3P7-201ENST00000400214 611 ntBASIC5.26□□□□□ -1.57
TNNC1P63316 RPS26P13-201ENST00000419030 330 ntBASIC5.26□□□□□ -1.57
TNNC1P63316 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms