Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.47□□□□□ -1.53
VCPP55072 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.47□□□□□ -1.53
VCPP55072 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.47□□□□□ -1.53
VCPP55072 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.47□□□□□ -1.53
VCPP55072 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.47□□□□□ -1.53
VCPP55072 AC002553.2-201ENST00000453217 340 ntBASIC5.47□□□□□ -1.53
VCPP55072 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.47□□□□□ -1.53
VCPP55072 AC245028.2-201ENST00000458673 253 ntBASIC5.47□□□□□ -1.53
VCPP55072 RPL7AP28-201ENST00000464513 571 ntBASIC5.47□□□□□ -1.53
VCPP55072 BTF3P13-201ENST00000513224 490 ntBASIC5.47□□□□□ -1.53
VCPP55072 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.47□□□□□ -1.53
VCPP55072 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.47□□□□□ -1.53
VCPP55072 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.47□□□□□ -1.53
VCPP55072 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VCPP55072 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.47□□□□□ -1.53
VCPP55072 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.47□□□□□ -1.53
VCPP55072 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.47□□□□□ -1.53
VCPP55072 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.47□□□□□ -1.53
VCPP55072 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.47□□□□□ -1.53
VCPP55072 VN1R81P-201ENST00000602085 372 ntBASIC5.47□□□□□ -1.53
VCPP55072 AL162431.4-201ENST00000604674 411 ntBASIC5.47□□□□□ -1.53
VCPP55072 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
VCPP55072 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
VCPP55072 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.47□□□□□ -1.53
VCPP55072 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.47□□□□□ -1.53
VCPP55072 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
VCPP55072 AC006210.2-201ENST00000367074 1545 ntBASIC5.47□□□□□ -1.53
VCPP55072 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VCPP55072 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VCPP55072 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
VCPP55072 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.47□□□□□ -1.53
VCPP55072 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
VCPP55072 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
VCPP55072 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
VCPP55072 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.46□□□□□ -1.53
VCPP55072 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.46□□□□□ -1.53
VCPP55072 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
VCPP55072 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
VCPP55072 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
VCPP55072 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
VCPP55072 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
VCPP55072 FAM3C2-201ENST00000312214 681 ntBASIC5.46□□□□□ -1.54
VCPP55072 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VCPP55072 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
VCPP55072 CHEK2P3-201ENST00000416118 248 ntBASIC5.46□□□□□ -1.54
VCPP55072 TCEA1P3-201ENST00000443005 880 ntBASIC5.46□□□□□ -1.54
VCPP55072 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.46□□□□□ -1.54
VCPP55072 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.46□□□□□ -1.54
VCPP55072 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.46□□□□□ -1.54
VCPP55072 OR9N1P-201ENST00000491296 333 ntBASIC5.46□□□□□ -1.54
VCPP55072 RN7SL604P-201ENST00000492589 296 ntBASIC5.46□□□□□ -1.54
VCPP55072 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VCPP55072 MTCO3P42-201ENST00000509488 518 ntBASIC5.46□□□□□ -1.54
VCPP55072 AC026402.1-201ENST00000513642 170 ntBASIC5.46□□□□□ -1.54
VCPP55072 MTCO3P39-201ENST00000514812 518 ntBASIC5.46□□□□□ -1.54
VCPP55072 RNU6-513P-201ENST00000516104 104 ntBASIC5.46□□□□□ -1.54
VCPP55072 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VCPP55072 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.46□□□□□ -1.54
VCPP55072 AC068993.1-201ENST00000546724 589 ntBASIC5.46□□□□□ -1.54
VCPP55072 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.46□□□□□ -1.54
VCPP55072 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.46□□□□□ -1.54
VCPP55072 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.46□□□□□ -1.54
VCPP55072 AL713998.2-201ENST00000604538 1198 ntBASIC5.46□□□□□ -1.54
VCPP55072 AC009597.2-201ENST00000604659 592 ntBASIC5.46□□□□□ -1.54
VCPP55072 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
VCPP55072 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VCPP55072 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.46□□□□□ -1.54
VCPP55072 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VCPP55072 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
VCPP55072 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
VCPP55072 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VCPP55072 AC091046.3-201ENST00000631455 1574 ntBASIC5.46□□□□□ -1.54
VCPP55072 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.46□□□□□ -1.54
VCPP55072 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
VCPP55072 MUC2-202ENST00000613187 4845 ntBASIC5.45□□□□□ -1.54
VCPP55072 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
VCPP55072 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VCPP55072 AL606537.1-201ENST00000607258 2011 ntBASIC5.45□□□□□ -1.54
VCPP55072 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VCPP55072 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VCPP55072 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VCPP55072 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VCPP55072 PCNPP4-201ENST00000414817 517 ntBASIC5.45□□□□□ -1.54
VCPP55072 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.45□□□□□ -1.54
VCPP55072 AC069213.2-201ENST00000420238 366 ntBASIC5.45□□□□□ -1.54
VCPP55072 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.45□□□□□ -1.54
VCPP55072 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.45□□□□□ -1.54
VCPP55072 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.45□□□□□ -1.54
VCPP55072 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.45□□□□□ -1.54
VCPP55072 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.45□□□□□ -1.54
VCPP55072 MTCO3P17-201ENST00000443775 513 ntBASIC5.45□□□□□ -1.54
VCPP55072 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.45□□□□□ -1.54
VCPP55072 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.45□□□□□ -1.54
VCPP55072 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
VCPP55072 RN7SL41P-201ENST00000476144 297 ntBASIC5.45□□□□□ -1.54
VCPP55072 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.45□□□□□ -1.54
VCPP55072 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.45□□□□□ -1.54
VCPP55072 AC093824.1-201ENST00000508796 343 ntBASIC5.45□□□□□ -1.54
VCPP55072 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.45□□□□□ -1.54
VCPP55072 RN7SKP34-201ENST00000516142 244 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms