Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 Z86062.1-201ENST00000406773 777 ntBASIC5.18□□□□□ -1.58
CLCNKAP51800 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.18□□□□□ -1.58
CLCNKAP51800 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.18□□□□□ -1.58
CLCNKAP51800 AC092570.3-201ENST00000420113 693 ntBASIC5.18□□□□□ -1.58
CLCNKAP51800 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLCNKAP51800 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.18□□□□□ -1.58
CLCNKAP51800 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.18□□□□□ -1.58
CLCNKAP51800 CBX1P5-201ENST00000475330 559 ntBASIC5.18□□□□□ -1.58
CLCNKAP51800 HMGB1P3-201ENST00000502802 616 ntBASIC5.18□□□□□ -1.58
CLCNKAP51800 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLCNKAP51800 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
CLCNKAP51800 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.18□□□□□ -1.58
CLCNKAP51800 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.18□□□□□ -1.58
CLCNKAP51800 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.18□□□□□ -1.58
CLCNKAP51800 AC233266.2-201ENST00000567067 528 ntBASIC5.18□□□□□ -1.58
CLCNKAP51800 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CLCNKAP51800 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.18□□□□□ -1.58
CLCNKAP51800 AC005242.1-201ENST00000585658 438 ntBASIC5.18□□□□□ -1.58
CLCNKAP51800 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLCNKAP51800 MTATP6P2-201ENST00000603319 678 ntBASIC5.18□□□□□ -1.58
CLCNKAP51800 AC026979.4-201ENST00000606555 645 ntBASIC5.18□□□□□ -1.58
CLCNKAP51800 AC104763.3-201ENST00000613765 618 ntBASIC5.18□□□□□ -1.58
CLCNKAP51800 AC245389.2-201ENST00000616023 576 ntBASIC5.18□□□□□ -1.58
CLCNKAP51800 AL645927.2-201ENST00000618350 349 ntBASIC5.18□□□□□ -1.58
CLCNKAP51800 AC242843.1-201ENST00000618702 573 ntBASIC5.18□□□□□ -1.58
CLCNKAP51800 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLCNKAP51800 AC009269.6-201ENST00000621778 588 ntBASIC5.18□□□□□ -1.58
CLCNKAP51800 AC019080.5-201ENST00000624891 757 ntBASIC5.18□□□□□ -1.58
CLCNKAP51800 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.18□□□□□ -1.58
CLCNKAP51800 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.18□□□□□ -1.58
CLCNKAP51800 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLCNKAP51800 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLCNKAP51800 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.18□□□□□ -1.58
CLCNKAP51800 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLCNKAP51800 AC092376.2-201ENST00000622621 4116 ntBASIC5.18□□□□□ -1.58
CLCNKAP51800 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CLCNKAP51800 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.18□□□□□ -1.58
CLCNKAP51800 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
CLCNKAP51800 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CLCNKAP51800 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLCNKAP51800 PANDAR-201ENST00000629595 1506 ntBASIC5.18□□□□□ -1.58
CLCNKAP51800 AC092747.4-201ENST00000620519 1861 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 AL022311.1-201ENST00000623726 19416 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CLCNKAP51800 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLCNKAP51800 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLCNKAP51800 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLCNKAP51800 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLCNKAP51800 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLCNKAP51800 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLCNKAP51800 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLCNKAP51800 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.17□□□□□ -1.58
CLCNKAP51800 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLCNKAP51800 U3.3-201ENST00000362986 216 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 U8.4-201ENST00000363626 134 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 RNU6-1251P-201ENST00000364502 107 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.17□□□□□ -1.58
CLCNKAP51800 MIR765-201ENST00000390226 114 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CLCNKAP51800 ATP5F1P6-201ENST00000402768 767 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 U3.36-201ENST00000408418 213 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 DPPA2P3-201ENST00000411853 655 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 AC069282.1-201ENST00000411911 526 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.17□□□□□ -1.58
CLCNKAP51800 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.17□□□□□ -1.58
CLCNKAP51800 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.17□□□□□ -1.58
CLCNKAP51800 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.17□□□□□ -1.58
CLCNKAP51800 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.17□□□□□ -1.58
CLCNKAP51800 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.17□□□□□ -1.58
CLCNKAP51800 MRPL50P1-201ENST00000431951 384 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLCNKAP51800 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.17□□□□□ -1.58
CLCNKAP51800 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.17□□□□□ -1.58
CLCNKAP51800 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.17□□□□□ -1.58
CLCNKAP51800 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.17□□□□□ -1.58
CLCNKAP51800 AC018635.1-201ENST00000468292 1030 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 RPS18P6-201ENST00000476880 458 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 AC022133.1-201ENST00000490961 571 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 RPL15P21-201ENST00000495592 567 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.17□□□□□ -1.58
CLCNKAP51800 AC008953.1-201ENST00000497334 318 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CLCNKAP51800 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.17□□□□□ -1.58
CLCNKAP51800 GTF2F2P1-201ENST00000511083 675 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 RNU6-334P-201ENST00000517072 102 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 AC018442.3-201ENST00000523025 183 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.17□□□□□ -1.58
CLCNKAP51800 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.17□□□□□ -1.58
CLCNKAP51800 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.17□□□□□ -1.58
CLCNKAP51800 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLCNKAP51800 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.17□□□□□ -1.58
CLCNKAP51800 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.17□□□□□ -1.58
CLCNKAP51800 AC007448.1-201ENST00000582714 234 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.17□□□□□ -1.58
CLCNKAP51800 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.17□□□□□ -1.58
CLCNKAP51800 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.17□□□□□ -1.58
CLCNKAP51800 AC133794.1-201ENST00000602731 914 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 AL137072.1-201ENST00000603444 466 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 AC009597.2-201ENST00000604659 592 ntBASIC5.17□□□□□ -1.58
CLCNKAP51800 AL162431.4-201ENST00000604674 411 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms