Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.61□□□□□ -1.67
RFC3P40938 KNOP1P3-201ENST00000446933 426 ntBASIC4.61□□□□□ -1.67
RFC3P40938 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.61□□□□□ -1.67
RFC3P40938 TCEA1P1-201ENST00000449716 880 ntBASIC4.61□□□□□ -1.67
RFC3P40938 IGHV5-78-201ENST00000450948 295 ntBASIC4.61□□□□□ -1.67
RFC3P40938 AC022795.1-201ENST00000473808 480 ntBASIC4.61□□□□□ -1.67
RFC3P40938 RPL7P16-201ENST00000479738 738 ntBASIC4.61□□□□□ -1.67
RFC3P40938 RN7SL319P-201ENST00000480656 221 ntBASIC4.61□□□□□ -1.67
RFC3P40938 AC090142.2-201ENST00000483263 416 ntBASIC4.61□□□□□ -1.67
RFC3P40938 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.61□□□□□ -1.67
RFC3P40938 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.61□□□□□ -1.67
RFC3P40938 MRPS33P2-201ENST00000507850 322 ntBASIC4.61□□□□□ -1.67
RFC3P40938 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.61□□□□□ -1.67
RFC3P40938 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.61□□□□□ -1.67
RFC3P40938 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.61□□□□□ -1.67
RFC3P40938 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.61□□□□□ -1.67
RFC3P40938 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.61□□□□□ -1.67
RFC3P40938 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.61□□□□□ -1.67
RFC3P40938 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.61□□□□□ -1.67
RFC3P40938 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.61□□□□□ -1.67
RFC3P40938 EIF1P5-201ENST00000585002 234 ntBASIC4.61□□□□□ -1.67
RFC3P40938 MIR6820-201ENST00000611508 62 ntBASIC4.61□□□□□ -1.67
RFC3P40938 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFC3P40938 AC074140.1-201ENST00000621617 208 ntBASIC4.61□□□□□ -1.67
RFC3P40938 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.61□□□□□ -1.67
RFC3P40938 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.61□□□□□ -1.67
RFC3P40938 AC063976.2-201ENST00000425667 3556 ntBASIC4.61□□□□□ -1.67
RFC3P40938 AC132825.1-201ENST00000463573 2247 ntBASIC4.61□□□□□ -1.67
RFC3P40938 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
RFC3P40938 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.61□□□□□ -1.67
RFC3P40938 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFC3P40938 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFC3P40938 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.61□□□□□ -1.67
RFC3P40938 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RFC3P40938 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFC3P40938 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.6□□□□□ -1.67
RFC3P40938 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.6□□□□□ -1.67
RFC3P40938 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFC3P40938 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFC3P40938 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.6□□□□□ -1.67
RFC3P40938 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFC3P40938 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFC3P40938 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.6□□□□□ -1.67
RFC3P40938 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.6□□□□□ -1.67
RFC3P40938 RN7SKP113-201ENST00000363891 295 ntBASIC4.6□□□□□ -1.67
RFC3P40938 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFC3P40938 SNORA70.10-201ENST00000384515 134 ntBASIC4.6□□□□□ -1.67
RFC3P40938 CYB5AP4-201ENST00000396692 399 ntBASIC4.6□□□□□ -1.67
RFC3P40938 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFC3P40938 COX5BP7-201ENST00000414780 274 ntBASIC4.6□□□□□ -1.67
RFC3P40938 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.6□□□□□ -1.67
RFC3P40938 VN1R31P-201ENST00000417498 730 ntBASIC4.6□□□□□ -1.67
RFC3P40938 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.6□□□□□ -1.67
RFC3P40938 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.6□□□□□ -1.67
RFC3P40938 RPL7AP49-201ENST00000429522 581 ntBASIC4.6□□□□□ -1.67
RFC3P40938 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.6□□□□□ -1.67
RFC3P40938 AL591438.1-201ENST00000433508 581 ntBASIC4.6□□□□□ -1.67
RFC3P40938 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.6□□□□□ -1.67
RFC3P40938 AC073648.4-201ENST00000442655 781 ntBASIC4.6□□□□□ -1.67
RFC3P40938 RPS6P2-201ENST00000454208 705 ntBASIC4.6□□□□□ -1.67
RFC3P40938 AC091180.1-201ENST00000462104 372 ntBASIC4.6□□□□□ -1.67
RFC3P40938 AL591473.1-201ENST00000464297 313 ntBASIC4.6□□□□□ -1.67
RFC3P40938 AC092324.1-201ENST00000468671 324 ntBASIC4.6□□□□□ -1.67
RFC3P40938 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFC3P40938 ARL4AP1-201ENST00000503220 705 ntBASIC4.6□□□□□ -1.67
RFC3P40938 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.6□□□□□ -1.67
RFC3P40938 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFC3P40938 RN7SKP34-201ENST00000516142 244 ntBASIC4.6□□□□□ -1.67
RFC3P40938 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.6□□□□□ -1.67
RFC3P40938 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.6□□□□□ -1.67
RFC3P40938 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.6□□□□□ -1.67
RFC3P40938 PCNPP1-201ENST00000552501 511 ntBASIC4.6□□□□□ -1.67
RFC3P40938 NMNAT1P1-201ENST00000554095 876 ntBASIC4.6□□□□□ -1.67
RFC3P40938 AL121839.1-201ENST00000556233 1185 ntBASIC4.6□□□□□ -1.67
RFC3P40938 AC009117.1-201ENST00000563948 554 ntBASIC4.6□□□□□ -1.67
RFC3P40938 RN7SL290P-201ENST00000578661 300 ntBASIC4.6□□□□□ -1.67
RFC3P40938 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.6□□□□□ -1.67
RFC3P40938 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.6□□□□□ -1.67
RFC3P40938 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.6□□□□□ -1.67
RFC3P40938 AC005084.1-201ENST00000605160 304 ntBASIC4.6□□□□□ -1.67
RFC3P40938 MIR6839-201ENST00000620425 113 ntBASIC4.6□□□□□ -1.67
RFC3P40938 AC112694.2-201ENST00000623697 768 ntBASIC4.6□□□□□ -1.67
RFC3P40938 AL596275.2-204ENST00000641628 552 ntBASIC4.6□□□□□ -1.67
RFC3P40938 AL596275.2-206ENST00000641957 626 ntBASIC4.6□□□□□ -1.67
RFC3P40938 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFC3P40938 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.6□□□□□ -1.67
RFC3P40938 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.6□□□□□ -1.67
RFC3P40938 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RFC3P40938 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.6□□□□□ -1.67
RFC3P40938 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
RFC3P40938 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
RFC3P40938 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.59□□□□□ -1.67
RFC3P40938 NEAT1-202ENST00000501122 22743 ntBASIC4.59□□□□□ -1.67
RFC3P40938 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.59□□□□□ -1.67
RFC3P40938 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RFC3P40938 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RFC3P40938 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
RFC3P40938 BMS1P3-201ENST00000372011 932 ntBASIC4.59□□□□□ -1.67
RFC3P40938 OR1L6-202ENST00000373684 1044 ntBASIC4.59□□□□□ -1.67
RFC3P40938 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms