Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
FDFT1P37268 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
FDFT1P37268 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.97□□□□□ -1.61
FDFT1P37268 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
FDFT1P37268 OR13C3-201ENST00000374781 1108 ntBASIC4.97□□□□□ -1.61
FDFT1P37268 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.97□□□□□ -1.61
FDFT1P37268 RN7SKP199-201ENST00000410325 305 ntBASIC4.97□□□□□ -1.61
FDFT1P37268 RNA5SP345-201ENST00000410646 108 ntBASIC4.97□□□□□ -1.61
FDFT1P37268 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.97□□□□□ -1.61
FDFT1P37268 TBCAP2-201ENST00000416175 326 ntBASIC4.97□□□□□ -1.61
FDFT1P37268 BMS1P13-201ENST00000417301 885 ntBASIC4.97□□□□□ -1.61
FDFT1P37268 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.97□□□□□ -1.61
FDFT1P37268 EIF4A1P1-201ENST00000420241 934 ntBASIC4.97□□□□□ -1.61
FDFT1P37268 AC079355.1-201ENST00000421770 223 ntBASIC4.97□□□□□ -1.61
FDFT1P37268 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.97□□□□□ -1.61
FDFT1P37268 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.97□□□□□ -1.61
FDFT1P37268 OTX2P1-201ENST00000450956 354 ntBASIC4.97□□□□□ -1.61
FDFT1P37268 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
FDFT1P37268 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.97□□□□□ -1.61
FDFT1P37268 AC090114.3-201ENST00000479267 829 ntBASIC4.97□□□□□ -1.61
FDFT1P37268 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.97□□□□□ -1.61
FDFT1P37268 RNU6-709P-201ENST00000517257 104 ntBASIC4.97□□□□□ -1.61
FDFT1P37268 AC022616.2-201ENST00000523185 300 ntBASIC4.97□□□□□ -1.61
FDFT1P37268 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.97□□□□□ -1.61
FDFT1P37268 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.97□□□□□ -1.61
FDFT1P37268 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.97□□□□□ -1.61
FDFT1P37268 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.97□□□□□ -1.61
FDFT1P37268 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.97□□□□□ -1.61
FDFT1P37268 MIR4675-201ENST00000577898 77 ntBASIC4.97□□□□□ -1.61
FDFT1P37268 AP000919.1-201ENST00000582850 985 ntBASIC4.97□□□□□ -1.61
FDFT1P37268 MIR4691-201ENST00000583764 85 ntBASIC4.97□□□□□ -1.61
FDFT1P37268 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.97□□□□□ -1.61
FDFT1P37268 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.97□□□□□ -1.61
FDFT1P37268 SUMO2P15-201ENST00000604285 278 ntBASIC4.97□□□□□ -1.61
FDFT1P37268 AC010424.2-201ENST00000607594 443 ntBASIC4.97□□□□□ -1.61
FDFT1P37268 AC093799.2-201ENST00000610062 578 ntBASIC4.97□□□□□ -1.61
FDFT1P37268 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.97□□□□□ -1.61
FDFT1P37268 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
FDFT1P37268 LINC01739-205ENST00000641890 573 ntBASIC4.97□□□□□ -1.61
FDFT1P37268 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.97□□□□□ -1.61
FDFT1P37268 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
FDFT1P37268 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.97□□□□□ -1.61
FDFT1P37268 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.97□□□□□ -1.61
FDFT1P37268 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.97□□□□□ -1.61
FDFT1P37268 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
FDFT1P37268 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
FDFT1P37268 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
FDFT1P37268 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
FDFT1P37268 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.96□□□□□ -1.61
FDFT1P37268 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.62
FDFT1P37268 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.96□□□□□ -1.62
FDFT1P37268 SMG1P6-201ENST00000532337 2930 ntBASIC4.96□□□□□ -1.62
FDFT1P37268 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.96□□□□□ -1.62
FDFT1P37268 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
FDFT1P37268 VN1R37P-201ENST00000419096 748 ntBASIC4.96□□□□□ -1.62
FDFT1P37268 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.96□□□□□ -1.62
FDFT1P37268 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.96□□□□□ -1.62
FDFT1P37268 AL451139.1-201ENST00000434718 346 ntBASIC4.96□□□□□ -1.62
FDFT1P37268 RHOT1P3-201ENST00000436571 331 ntBASIC4.96□□□□□ -1.62
FDFT1P37268 AL445433.1-201ENST00000457507 257 ntBASIC4.96□□□□□ -1.62
FDFT1P37268 MTND6P32-201ENST00000457611 483 ntBASIC4.96□□□□□ -1.62
FDFT1P37268 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
FDFT1P37268 RN7SL558P-201ENST00000497468 299 ntBASIC4.96□□□□□ -1.62
FDFT1P37268 ARL4AP1-201ENST00000503220 705 ntBASIC4.96□□□□□ -1.62
FDFT1P37268 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.96□□□□□ -1.62
FDFT1P37268 AC004980.4-201ENST00000513375 203 ntBASIC4.96□□□□□ -1.62
FDFT1P37268 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.96□□□□□ -1.62
FDFT1P37268 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.96□□□□□ -1.62
FDFT1P37268 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.96□□□□□ -1.62
FDFT1P37268 SNORD39.2-201ENST00000579995 76 ntBASIC4.96□□□□□ -1.62
FDFT1P37268 MIR1269B-201ENST00000580405 75 ntBASIC4.96□□□□□ -1.62
FDFT1P37268 AC006116.3-201ENST00000592968 361 ntBASIC4.96□□□□□ -1.62
FDFT1P37268 MEMO1P5-201ENST00000604810 406 ntBASIC4.96□□□□□ -1.62
FDFT1P37268 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.96□□□□□ -1.62
FDFT1P37268 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.96□□□□□ -1.62
FDFT1P37268 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.96□□□□□ -1.62
FDFT1P37268 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
FDFT1P37268 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
FDFT1P37268 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
FDFT1P37268 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
FDFT1P37268 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
FDFT1P37268 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
FDFT1P37268 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.95□□□□□ -1.62
FDFT1P37268 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
FDFT1P37268 SALL4P2-201ENST00000423288 2910 ntBASIC4.95□□□□□ -1.62
FDFT1P37268 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
FDFT1P37268 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
FDFT1P37268 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
FDFT1P37268 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
FDFT1P37268 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
FDFT1P37268 RPL23P2-201ENST00000320371 421 ntBASIC4.95□□□□□ -1.62
FDFT1P37268 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.95□□□□□ -1.62
FDFT1P37268 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
FDFT1P37268 RNU6-171P-201ENST00000384354 107 ntBASIC4.95□□□□□ -1.62
FDFT1P37268 SNORA70-201ENST00000384436 135 ntBASIC4.95□□□□□ -1.62
FDFT1P37268 HMGB3P7-201ENST00000400214 611 ntBASIC4.95□□□□□ -1.62
FDFT1P37268 AP002530.1-201ENST00000405705 684 ntBASIC4.95□□□□□ -1.62
FDFT1P37268 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
FDFT1P37268 GJA6P-201ENST00000415117 1042 ntBASIC4.95□□□□□ -1.62
FDFT1P37268 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms