Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 APOOP2-201ENST00000461561 539 ntBASIC5.4□□□□□ -1.54
CTNNA1P35221 AL133445.1-201ENST00000467051 452 ntBASIC5.4□□□□□ -1.54
CTNNA1P35221 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CTNNA1P35221 RPS27AP16-201ENST00000492222 470 ntBASIC5.4□□□□□ -1.54
CTNNA1P35221 HMGB1P3-201ENST00000502802 616 ntBASIC5.4□□□□□ -1.54
CTNNA1P35221 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.4□□□□□ -1.54
CTNNA1P35221 SNORA48.9-201ENST00000516419 162 ntBASIC5.4□□□□□ -1.54
CTNNA1P35221 AC012400.1-201ENST00000518452 381 ntBASIC5.4□□□□□ -1.54
CTNNA1P35221 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.4□□□□□ -1.54
CTNNA1P35221 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CTNNA1P35221 AC126177.5-201ENST00000549599 178 ntBASIC5.4□□□□□ -1.54
CTNNA1P35221 DPRXP4-201ENST00000578053 568 ntBASIC5.4□□□□□ -1.54
CTNNA1P35221 AL139407.1-201ENST00000613826 1175 ntBASIC5.4□□□□□ -1.54
CTNNA1P35221 AC015871.5-202ENST00000623252 701 ntBASIC5.4□□□□□ -1.54
CTNNA1P35221 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CTNNA1P35221 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CTNNA1P35221 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CTNNA1P35221 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.4□□□□□ -1.55
CTNNA1P35221 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.4□□□□□ -1.55
CTNNA1P35221 PCAT14-202ENST00000627127 3935 ntBASIC5.4□□□□□ -1.55
CTNNA1P35221 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CTNNA1P35221 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CTNNA1P35221 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CTNNA1P35221 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTNNA1P35221 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTNNA1P35221 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTNNA1P35221 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.39□□□□□ -1.55
CTNNA1P35221 AC017002.4-201ENST00000604721 1525 ntBASIC5.39□□□□□ -1.55
CTNNA1P35221 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.39□□□□□ -1.55
CTNNA1P35221 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CTNNA1P35221 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CTNNA1P35221 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.39□□□□□ -1.55
CTNNA1P35221 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTNNA1P35221 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTNNA1P35221 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CTNNA1P35221 UBBP2-201ENST00000376781 231 ntBASIC5.39□□□□□ -1.55
CTNNA1P35221 AL359643.1-201ENST00000404109 423 ntBASIC5.39□□□□□ -1.55
CTNNA1P35221 MIR1271-201ENST00000408537 86 ntBASIC5.39□□□□□ -1.55
CTNNA1P35221 RN7SKP247-201ENST00000411094 308 ntBASIC5.39□□□□□ -1.55
CTNNA1P35221 TRGV6-201ENST00000417928 299 ntBASIC5.39□□□□□ -1.55
CTNNA1P35221 EI24P4-201ENST00000423683 1078 ntBASIC5.39□□□□□ -1.55
CTNNA1P35221 COX6CP13-201ENST00000428703 226 ntBASIC5.39□□□□□ -1.55
CTNNA1P35221 RPL12P46-201ENST00000436610 195 ntBASIC5.39□□□□□ -1.55
CTNNA1P35221 RPS29P10-201ENST00000439197 166 ntBASIC5.39□□□□□ -1.55
CTNNA1P35221 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.39□□□□□ -1.55
CTNNA1P35221 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTNNA1P35221 YWHAEP1-201ENST00000453697 763 ntBASIC5.39□□□□□ -1.55
CTNNA1P35221 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.39□□□□□ -1.55
CTNNA1P35221 RNU6-889P-201ENST00000517189 103 ntBASIC5.39□□□□□ -1.55
CTNNA1P35221 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.39□□□□□ -1.55
CTNNA1P35221 AC027544.3-201ENST00000535082 757 ntBASIC5.39□□□□□ -1.55
CTNNA1P35221 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.39□□□□□ -1.55
CTNNA1P35221 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.39□□□□□ -1.55
CTNNA1P35221 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.39□□□□□ -1.55
CTNNA1P35221 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.39□□□□□ -1.55
CTNNA1P35221 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.39□□□□□ -1.55
CTNNA1P35221 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.39□□□□□ -1.55
CTNNA1P35221 AC012557.1-201ENST00000607115 611 ntBASIC5.39□□□□□ -1.55
CTNNA1P35221 AC090948.2-201ENST00000607363 564 ntBASIC5.39□□□□□ -1.55
CTNNA1P35221 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.39□□□□□ -1.55
CTNNA1P35221 AC127024.6-201ENST00000621598 424 ntBASIC5.39□□□□□ -1.55
CTNNA1P35221 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.39□□□□□ -1.55
CTNNA1P35221 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.39□□□□□ -1.55
CTNNA1P35221 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
CTNNA1P35221 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CTNNA1P35221 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CTNNA1P35221 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTNNA1P35221 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTNNA1P35221 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTNNA1P35221 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTNNA1P35221 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTNNA1P35221 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
CTNNA1P35221 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.39□□□□□ -1.55
CTNNA1P35221 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CTNNA1P35221 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CTNNA1P35221 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CTNNA1P35221 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTNNA1P35221 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CTNNA1P35221 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTNNA1P35221 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CTNNA1P35221 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CTNNA1P35221 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTNNA1P35221 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTNNA1P35221 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CTNNA1P35221 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CTNNA1P35221 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTNNA1P35221 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CTNNA1P35221 AC013442.1-201ENST00000397347 228 ntBASIC5.38□□□□□ -1.55
CTNNA1P35221 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.38□□□□□ -1.55
CTNNA1P35221 NUDT19P3-201ENST00000404698 555 ntBASIC5.38□□□□□ -1.55
CTNNA1P35221 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.38□□□□□ -1.55
CTNNA1P35221 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.38□□□□□ -1.55
CTNNA1P35221 EIF4A1P3-201ENST00000411521 244 ntBASIC5.38□□□□□ -1.55
CTNNA1P35221 AL133325.1-201ENST00000421090 382 ntBASIC5.38□□□□□ -1.55
CTNNA1P35221 RPS4XP16-201ENST00000427198 791 ntBASIC5.38□□□□□ -1.55
CTNNA1P35221 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.38□□□□□ -1.55
CTNNA1P35221 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.38□□□□□ -1.55
CTNNA1P35221 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.38□□□□□ -1.55
CTNNA1P35221 AL161636.2-201ENST00000445179 927 ntBASIC5.38□□□□□ -1.55
CTNNA1P35221 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms