Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 OR5G4P-201ENST00000525251 760 ntBASIC7.53□□□□□ -1.2
RXRBP28702 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC7.53□□□□□ -1.2
RXRBP28702 EDDM3DP-201ENST00000554692 434 ntBASIC7.53□□□□□ -1.2
RXRBP28702 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.53□□□□□ -1.2
RXRBP28702 AC005242.1-201ENST00000585658 438 ntBASIC7.53□□□□□ -1.2
RXRBP28702 AL109618.2-201ENST00000605527 211 ntBASIC7.53□□□□□ -1.2
RXRBP28702 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.53□□□□□ -1.2
RXRBP28702 FTO-223ENST00000640179 210 ntTSL 5 BASIC7.53□□□□□ -1.2
RXRBP28702 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC7.53□□□□□ -1.2
RXRBP28702 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
RXRBP28702 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RXRBP28702 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RXRBP28702 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RXRBP28702 OR4G1P-202ENST00000641173 1788 ntBASIC7.53□□□□□ -1.2
RXRBP28702 SALL4P7-201ENST00000555779 3120 ntBASIC7.53□□□□□ -1.2
RXRBP28702 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
RXRBP28702 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.53□□□□□ -1.2
RXRBP28702 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
RXRBP28702 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC7.53□□□□□ -1.2
RXRBP28702 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RXRBP28702 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC7.52□□□□□ -1.2
RXRBP28702 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.52□□□□□ -1.2
RXRBP28702 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
RXRBP28702 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RXRBP28702 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RXRBP28702 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RXRBP28702 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RXRBP28702 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RXRBP28702 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.52□□□□□ -1.21
RXRBP28702 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.52□□□□□ -1.21
RXRBP28702 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RXRBP28702 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC7.52□□□□□ -1.21
RXRBP28702 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.52□□□□□ -1.21
RXRBP28702 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RXRBP28702 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RXRBP28702 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RXRBP28702 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RXRBP28702 RNU4-92P-201ENST00000363783 136 ntBASIC7.52□□□□□ -1.21
RXRBP28702 RNA5SP211-201ENST00000365516 117 ntBASIC7.52□□□□□ -1.21
RXRBP28702 OR13C3-201ENST00000374781 1108 ntBASIC7.52□□□□□ -1.21
RXRBP28702 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RXRBP28702 RNU6-481P-201ENST00000384194 107 ntBASIC7.52□□□□□ -1.21
RXRBP28702 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC7.52□□□□□ -1.21
RXRBP28702 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.52□□□□□ -1.21
RXRBP28702 ELOCP9-201ENST00000418624 239 ntBASIC7.52□□□□□ -1.21
RXRBP28702 NENFP1-201ENST00000419476 466 ntBASIC7.52□□□□□ -1.21
RXRBP28702 MTND4P28-201ENST00000426217 387 ntBASIC7.52□□□□□ -1.21
RXRBP28702 DSTNP5-201ENST00000427921 523 ntBASIC7.52□□□□□ -1.21
RXRBP28702 MRPS10P2-201ENST00000431226 381 ntBASIC7.52□□□□□ -1.21
RXRBP28702 GTF2IP3-201ENST00000433887 494 ntBASIC7.52□□□□□ -1.21
RXRBP28702 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC7.52□□□□□ -1.21
RXRBP28702 ZDHHC20P1-204ENST00000435787 423 ntBASIC7.52□□□□□ -1.21
RXRBP28702 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RXRBP28702 MRPL35P4-201ENST00000453682 566 ntBASIC7.52□□□□□ -1.21
RXRBP28702 AP002345.1-201ENST00000456493 928 ntBASIC7.52□□□□□ -1.21
RXRBP28702 RPL7P16-201ENST00000479738 738 ntBASIC7.52□□□□□ -1.21
RXRBP28702 AC092824.1-201ENST00000483524 576 ntBASIC7.52□□□□□ -1.21
RXRBP28702 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.52□□□□□ -1.21
RXRBP28702 AC093824.1-201ENST00000508796 343 ntBASIC7.52□□□□□ -1.21
RXRBP28702 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC7.52□□□□□ -1.21
RXRBP28702 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC7.52□□□□□ -1.21
RXRBP28702 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC7.52□□□□□ -1.21
RXRBP28702 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC7.52□□□□□ -1.21
RXRBP28702 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RXRBP28702 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC7.52□□□□□ -1.21
RXRBP28702 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC7.52□□□□□ -1.21
RXRBP28702 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC7.52□□□□□ -1.21
RXRBP28702 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC7.52□□□□□ -1.21
RXRBP28702 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC7.52□□□□□ -1.21
RXRBP28702 MIR3189-201ENST00000578735 73 ntBASIC7.52□□□□□ -1.21
RXRBP28702 MIR4270-201ENST00000581799 70 ntBASIC7.52□□□□□ -1.21
RXRBP28702 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC7.52□□□□□ -1.21
RXRBP28702 AC008759.1-201ENST00000589783 983 ntBASIC7.52□□□□□ -1.21
RXRBP28702 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC7.52□□□□□ -1.21
RXRBP28702 AL031985.2-201ENST00000600955 480 ntBASIC7.52□□□□□ -1.21
RXRBP28702 AC069307.1-201ENST00000602820 447 ntBASIC7.52□□□□□ -1.21
RXRBP28702 MTND3P19-201ENST00000603825 345 ntBASIC7.52□□□□□ -1.21
RXRBP28702 AL139286.2-201ENST00000606838 396 ntBASIC7.52□□□□□ -1.21
RXRBP28702 AF250324.2-201ENST00000608299 610 ntBASIC7.52□□□□□ -1.21
RXRBP28702 TUG1_1.1-201ENST00000610654 145 ntBASIC7.52□□□□□ -1.21
RXRBP28702 DLEU1_1.1-201ENST00000618107 190 ntBASIC7.52□□□□□ -1.21
RXRBP28702 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.52□□□□□ -1.21
RXRBP28702 AC087385.3-201ENST00000620477 187 ntBASIC7.52□□□□□ -1.21
RXRBP28702 AC091905.4-201ENST00000623432 202 ntBASIC7.52□□□□□ -1.21
RXRBP28702 AC079248.2-201ENST00000623779 326 ntBASIC7.52□□□□□ -1.21
RXRBP28702 AC007494.3-201ENST00000624660 743 ntBASIC7.52□□□□□ -1.21
RXRBP28702 GMFB-210ENST00000628554 639 ntTSL 4 BASIC7.52□□□□□ -1.21
RXRBP28702 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RXRBP28702 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RXRBP28702 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RXRBP28702 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RXRBP28702 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.52□□□□□ -1.21
RXRBP28702 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RXRBP28702 AC012020.1-201ENST00000624541 1728 ntBASIC7.52□□□□□ -1.21
RXRBP28702 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
RXRBP28702 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RXRBP28702 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
RXRBP28702 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RXRBP28702 ANKRD36BP1-202ENST00000604892 1417 ntBASIC7.52□□□□□ -1.21
RXRBP28702 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms