Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
RAB5AP20339 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC3.84□□□□□ -1.79
RAB5AP20339 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
RAB5AP20339 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.8
RAB5AP20339 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RAB5AP20339 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC3.84□□□□□ -1.8
RAB5AP20339 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
RAB5AP20339 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC3.83□□□□□ -1.8
RAB5AP20339 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAB5AP20339 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RAB5AP20339 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RAB5AP20339 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC3.83□□□□□ -1.8
RAB5AP20339 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC3.83□□□□□ -1.8
RAB5AP20339 RNU6-532P-201ENST00000384318 107 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RAB5AP20339 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAB5AP20339 AL607077.1-201ENST00000401718 499 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 U3.35-201ENST00000408405 208 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAB5AP20339 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAB5AP20339 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC3.83□□□□□ -1.8
RAB5AP20339 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAB5AP20339 OR2AM1P-201ENST00000422137 422 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 AL391219.1-201ENST00000422570 483 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 CLCN3P1-201ENST00000423965 1017 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC3.83□□□□□ -1.8
RAB5AP20339 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC3.83□□□□□ -1.8
RAB5AP20339 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC3.83□□□□□ -1.8
RAB5AP20339 AC092013.1-201ENST00000438795 332 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 ARL5AP3-201ENST00000439327 386 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 RPL5P7-201ENST00000444235 813 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC3.83□□□□□ -1.8
RAB5AP20339 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC3.83□□□□□ -1.8
RAB5AP20339 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC3.83□□□□□ -1.8
RAB5AP20339 ATP5A1P7-201ENST00000453978 1279 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 RNU6-1218P-201ENST00000458990 108 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.83□□□□□ -1.8
RAB5AP20339 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RAB5AP20339 AC022215.1-201ENST00000481770 362 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 AC058823.1-201ENST00000485315 474 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 AC018639.1-201ENST00000492994 442 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 AC108022.1-201ENST00000493466 478 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC3.83□□□□□ -1.8
RAB5AP20339 CDH12P2-201ENST00000504393 298 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.83□□□□□ -1.8
RAB5AP20339 PGBD4P4-201ENST00000509673 613 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC3.83□□□□□ -1.8
RAB5AP20339 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.83□□□□□ -1.8
RAB5AP20339 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RAB5AP20339 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC3.83□□□□□ -1.8
RAB5AP20339 PDCD5P1-201ENST00000543528 309 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC3.83□□□□□ -1.8
RAB5AP20339 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC3.83□□□□□ -1.8
RAB5AP20339 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC3.83□□□□□ -1.8
RAB5AP20339 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.83□□□□□ -1.8
RAB5AP20339 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.83□□□□□ -1.8
RAB5AP20339 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC3.83□□□□□ -1.8
RAB5AP20339 RN7SL230P-201ENST00000580835 303 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 RN7SL66P-201ENST00000582099 264 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC3.83□□□□□ -1.8
RAB5AP20339 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.83□□□□□ -1.8
RAB5AP20339 MIR4701-201ENST00000583094 63 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 PSMA6P4-201ENST00000603247 718 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 AC025946.2-201ENST00000603398 234 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 AL031601.1-201ENST00000605702 394 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 MIR6793-201ENST00000612376 63 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.83□□□□□ -1.8
RAB5AP20339 AC015819.1-201ENST00000613588 663 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 AC004801.6-201ENST00000616571 978 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.83□□□□□ -1.8
RAB5AP20339 AC015804.1-201ENST00000622935 435 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 AC019080.5-201ENST00000624891 757 ntBASIC3.83□□□□□ -1.8
RAB5AP20339 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RAB5AP20339 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAB5AP20339 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC3.83□□□□□ -1.8
RAB5AP20339 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.83□□□□□ -1.8
RAB5AP20339 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAB5AP20339 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RAB5AP20339 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC3.83□□□□□ -1.8
RAB5AP20339 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RAB5AP20339 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RAB5AP20339 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAB5AP20339 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
RAB5AP20339 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.83□□□□□ -1.8
RAB5AP20339 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
RAB5AP20339 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
RAB5AP20339 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.82□□□□□ -1.8
RAB5AP20339 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAB5AP20339 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAB5AP20339 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RAB5AP20339 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.82□□□□□ -1.8
RAB5AP20339 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.82□□□□□ -1.8
RAB5AP20339 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAB5AP20339 AL451142.2-201ENST00000429076 2090 ntBASIC3.82□□□□□ -1.8
RAB5AP20339 SPATA2P1-201ENST00000431223 2055 ntBASIC3.82□□□□□ -1.8
RAB5AP20339 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAB5AP20339 ZNF733P-202ENST00000444809 1573 ntBASIC3.82□□□□□ -1.8
RAB5AP20339 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RAB5AP20339 AL080312.1-201ENST00000256654 824 ntBASIC3.82□□□□□ -1.8
RAB5AP20339 RN7SKP6-201ENST00000364795 319 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms