Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.71□□□□□ -1.5
COL1A1P02452 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.71□□□□□ -1.5
COL1A1P02452 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
COL1A1P02452 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.71□□□□□ -1.5
COL1A1P02452 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL1A1P02452 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL1A1P02452 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL1A1P02452 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL1A1P02452 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL1A1P02452 AL590762.2-201ENST00000395798 571 ntBASIC5.71□□□□□ -1.5
COL1A1P02452 RN7SKP267-201ENST00000410381 285 ntBASIC5.71□□□□□ -1.5
COL1A1P02452 AL591848.1-201ENST00000413092 322 ntBASIC5.71□□□□□ -1.5
COL1A1P02452 AL732292.1-201ENST00000426692 226 ntBASIC5.71□□□□□ -1.5
COL1A1P02452 RPL35AP21-201ENST00000437667 333 ntBASIC5.71□□□□□ -1.5
COL1A1P02452 YWHAZP2-201ENST00000440317 728 ntBASIC5.71□□□□□ -1.5
COL1A1P02452 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL1A1P02452 BTF3P6-201ENST00000448054 499 ntBASIC5.71□□□□□ -1.5
COL1A1P02452 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
COL1A1P02452 SLC25A15P5-201ENST00000508033 253 ntBASIC5.71□□□□□ -1.5
COL1A1P02452 AC105031.1-201ENST00000518550 476 ntBASIC5.71□□□□□ -1.5
COL1A1P02452 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL1A1P02452 FKBP1BP1-201ENST00000553366 325 ntBASIC5.71□□□□□ -1.5
COL1A1P02452 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.71□□□□□ -1.5
COL1A1P02452 AC010857.1-201ENST00000606398 594 ntBASIC5.71□□□□□ -1.5
COL1A1P02452 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL1A1P02452 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.71□□□□□ -1.5
COL1A1P02452 AC006453.5-201ENST00000636451 619 ntBASIC5.71□□□□□ -1.5
COL1A1P02452 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.71□□□□□ -1.5
COL1A1P02452 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL1A1P02452 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COL1A1P02452 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
COL1A1P02452 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL1A1P02452 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL1A1P02452 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
COL1A1P02452 RNA5SP509-201ENST00000364577 119 ntBASIC5.7□□□□□ -1.5
COL1A1P02452 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.7□□□□□ -1.5
COL1A1P02452 AC013429.2-201ENST00000418798 781 ntBASIC5.7□□□□□ -1.5
COL1A1P02452 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.7□□□□□ -1.5
COL1A1P02452 AC093166.2-201ENST00000455969 1017 ntBASIC5.7□□□□□ -1.5
COL1A1P02452 AC093824.1-201ENST00000508796 343 ntBASIC5.7□□□□□ -1.5
COL1A1P02452 AC023575.1-201ENST00000580510 358 ntBASIC5.7□□□□□ -1.5
COL1A1P02452 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.7□□□□□ -1.5
COL1A1P02452 AC073137.1-201ENST00000605636 634 ntBASIC5.7□□□□□ -1.5
COL1A1P02452 AC008833.1-201ENST00000611633 691 ntBASIC5.7□□□□□ -1.5
COL1A1P02452 AL121890.3-201ENST00000618494 516 ntBASIC5.7□□□□□ -1.5
COL1A1P02452 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.7□□□□□ -1.5
COL1A1P02452 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL1A1P02452 AC018628.1-201ENST00000624147 3819 ntBASIC5.69□□□□□ -1.5
COL1A1P02452 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL1A1P02452 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL1A1P02452 CCT8P1-201ENST00000413611 1657 ntBASIC5.69□□□□□ -1.5
COL1A1P02452 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL1A1P02452 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL1A1P02452 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.69□□□□□ -1.5
COL1A1P02452 AL138820.1-201ENST00000617901 5305 ntBASIC5.69□□□□□ -1.5
COL1A1P02452 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL1A1P02452 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.69□□□□□ -1.5
COL1A1P02452 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
COL1A1P02452 OR4K17-201ENST00000315543 1032 ntBASIC5.69□□□□□ -1.5
COL1A1P02452 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.69□□□□□ -1.5
COL1A1P02452 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL1A1P02452 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.69□□□□□ -1.5
COL1A1P02452 AC007738.1-201ENST00000413892 348 ntBASIC5.69□□□□□ -1.5
COL1A1P02452 AC239367.2-201ENST00000447309 705 ntBASIC5.69□□□□□ -1.5
COL1A1P02452 AC011276.1-201ENST00000469688 323 ntBASIC5.69□□□□□ -1.5
COL1A1P02452 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.69□□□□□ -1.5
COL1A1P02452 AC007016.1-201ENST00000512110 244 ntBASIC5.69□□□□□ -1.5
COL1A1P02452 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.69□□□□□ -1.5
COL1A1P02452 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.69□□□□□ -1.5
COL1A1P02452 AL109766.1-201ENST00000555080 552 ntBASIC5.69□□□□□ -1.5
COL1A1P02452 AC100847.1-201ENST00000611316 481 ntBASIC5.69□□□□□ -1.5
COL1A1P02452 AC002044.3-201ENST00000623314 541 ntBASIC5.69□□□□□ -1.5
COL1A1P02452 AC120338.1-201ENST00000625074 1541 ntBASIC5.69□□□□□ -1.5
COL1A1P02452 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL1A1P02452 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.69□□□□□ -1.5
COL1A1P02452 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COL1A1P02452 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL1A1P02452 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL1A1P02452 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.68□□□□□ -1.5
COL1A1P02452 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.68□□□□□ -1.5
COL1A1P02452 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL1A1P02452 AC100778.3-201ENST00000580060 1750 ntBASIC5.68□□□□□ -1.5
COL1A1P02452 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL1A1P02452 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL1A1P02452 AC008549.2-201ENST00000333482 706 ntBASIC5.68□□□□□ -1.5
COL1A1P02452 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
COL1A1P02452 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL1A1P02452 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.68□□□□□ -1.5
COL1A1P02452 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.68□□□□□ -1.5
COL1A1P02452 CYCSP24-201ENST00000445119 316 ntBASIC5.68□□□□□ -1.5
COL1A1P02452 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COL1A1P02452 AL359219.2-201ENST00000555184 348 ntBASIC5.68□□□□□ -1.5
COL1A1P02452 RN7SL652P-201ENST00000577769 300 ntBASIC5.68□□□□□ -1.5
COL1A1P02452 AC127024.5-201ENST00000580085 462 ntBASIC5.68□□□□□ -1.5
COL1A1P02452 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.68□□□□□ -1.5
COL1A1P02452 BNIP3P22-201ENST00000593399 556 ntBASIC5.68□□□□□ -1.5
COL1A1P02452 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.68□□□□□ -1.5
COL1A1P02452 AP000648.2-201ENST00000624182 404 ntBASIC5.68□□□□□ -1.5
COL1A1P02452 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL1A1P02452 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms