Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 HMGB1P40-201ENST00000525121 540 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.95□□□□□ -1.62
NKX2-2O95096 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.95□□□□□ -1.62
NKX2-2O95096 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.95□□□□□ -1.62
NKX2-2O95096 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.95□□□□□ -1.62
NKX2-2O95096 RBM22P1-201ENST00000578589 1214 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.95□□□□□ -1.62
NKX2-2O95096 AC005252.1-201ENST00000604518 1063 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 AC007204.2-201ENST00000615022 616 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.95□□□□□ -1.62
NKX2-2O95096 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.95□□□□□ -1.62
NKX2-2O95096 AC099654.8-201ENST00000637757 681 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.95□□□□□ -1.62
NKX2-2O95096 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-2O95096 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
NKX2-2O95096 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
NKX2-2O95096 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NKX2-2O95096 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-2O95096 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.95□□□□□ -1.62
NKX2-2O95096 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
NKX2-2O95096 AC109446.4-201ENST00000623235 2755 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-2O95096 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.95□□□□□ -1.62
NKX2-2O95096 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-2O95096 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-2O95096 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX2-2O95096 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NKX2-2O95096 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-2O95096 AC093775.1-201ENST00000624154 1868 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.94□□□□□ -1.62
NKX2-2O95096 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-2O95096 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
NKX2-2O95096 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-2O95096 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
NKX2-2O95096 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-2O95096 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.94□□□□□ -1.62
NKX2-2O95096 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-2O95096 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-2O95096 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.94□□□□□ -1.62
NKX2-2O95096 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX2-2O95096 MIR133A2-201ENST00000347538 102 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 RNU6-249P-201ENST00000363016 102 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 RNU5B-4P-201ENST00000363508 111 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 RNA5SP242-201ENST00000364171 118 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 RNA5SP132-201ENST00000364725 118 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 RN7SKP153-201ENST00000365026 316 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 RN7SKP69-201ENST00000365390 305 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NKX2-2O95096 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NKX2-2O95096 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
NKX2-2O95096 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
NKX2-2O95096 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 OR4K12P-201ENST00000406538 961 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.94□□□□□ -1.62
NKX2-2O95096 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX2-2O95096 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX2-2O95096 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.94□□□□□ -1.62
NKX2-2O95096 REREP1Y-201ENST00000422655 198 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 OR5M12P-201ENST00000423388 929 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.94□□□□□ -1.62
NKX2-2O95096 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX2-2O95096 MTCO3P21-201ENST00000430791 643 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 CYCSP12-201ENST00000437729 300 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX2-2O95096 REREP2Y-201ENST00000439103 200 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 ARF4P4-201ENST00000439608 520 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 DNAJB5P1-201ENST00000454004 806 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX2-2O95096 AC092905.1-201ENST00000467527 949 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 HMGB1P38-201ENST00000490557 577 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-2O95096 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX2-2O95096 AC069306.1-201ENST00000507006 843 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX2-2O95096 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX2-2O95096 RPS27AP18-201ENST00000515536 459 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX2-2O95096 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX2-2O95096 IGKV3D-34-201ENST00000522638 302 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX2-2O95096 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX2-2O95096 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-2O95096 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX2-2O95096 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX2-2O95096 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX2-2O95096 AC010735.1-201ENST00000567305 1026 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.94□□□□□ -1.62
NKX2-2O95096 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
NKX2-2O95096 AC125494.2-201ENST00000602431 657 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 AC023762.1-201ENST00000603280 584 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 AL022394.1-201ENST00000606979 292 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 FAM72A-208ENST00000607379 1139 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 RNU6-1192P-201ENST00000612197 107 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 RNU6-489P-201ENST00000618289 107 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 AL512427.1-201ENST00000618593 349 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 AC023510.2-201ENST00000622162 746 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 AP003497.2-201ENST00000624220 967 ntBASIC4.94□□□□□ -1.62
NKX2-2O95096 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX2-2O95096 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX2-2O95096 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms