Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PDLIM1O00151 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.86□□□□□ -1.63
PDLIM1O00151 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM1O00151 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PDLIM1O00151 MIR323B-201ENST00000385269 82 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM1O00151 AL035079.1-201ENST00000405210 287 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 HDGFP1-201ENST00000405943 252 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.86□□□□□ -1.63
PDLIM1O00151 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.86□□□□□ -1.63
PDLIM1O00151 AC244453.4-201ENST00000419150 388 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM1O00151 YY1P1-201ENST00000427625 668 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM1O00151 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.86□□□□□ -1.63
PDLIM1O00151 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM1O00151 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM1O00151 DNAJB5P1-201ENST00000454004 806 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 AC006967.1-201ENST00000467608 589 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 AC100832.1-201ENST00000471945 383 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 RN7SL184P-201ENST00000488308 297 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM1O00151 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM1O00151 NDUFB4P12-201ENST00000513465 390 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 ATP5LP3-201ENST00000514223 304 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.86□□□□□ -1.63
PDLIM1O00151 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM1O00151 AC069240.1-201ENST00000548774 375 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM1O00151 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM1O00151 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM1O00151 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM1O00151 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.86□□□□□ -1.63
PDLIM1O00151 RN7SL708P-201ENST00000580952 299 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM1O00151 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.86□□□□□ -1.63
PDLIM1O00151 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.86□□□□□ -1.63
PDLIM1O00151 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM1O00151 BNIP3P7-201ENST00000605641 516 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 AC018695.5-201ENST00000605872 315 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.86□□□□□ -1.63
PDLIM1O00151 AC007204.2-201ENST00000615022 616 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 AL590410.1-201ENST00000617925 333 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 AC140113.4-201ENST00000622087 222 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 MIR8080-201ENST00000622224 89 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PDLIM1O00151 AL355480.1-201ENST00000629041 99 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM1O00151 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PDLIM1O00151 MAPK10-303ENST00000641324 3959 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM1O00151 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.86□□□□□ -1.63
PDLIM1O00151 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM1O00151 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM1O00151 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PDLIM1O00151 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM1O00151 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM1O00151 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
PDLIM1O00151 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.86□□□□□ -1.63
PDLIM1O00151 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM1O00151 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
PDLIM1O00151 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM1O00151 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.85□□□□□ -1.63
PDLIM1O00151 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.85□□□□□ -1.63
PDLIM1O00151 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.85□□□□□ -1.63
PDLIM1O00151 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM1O00151 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PDLIM1O00151 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.85□□□□□ -1.63
PDLIM1O00151 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM1O00151 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM1O00151 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM1O00151 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.85□□□□□ -1.63
PDLIM1O00151 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM1O00151 AL645733.1-201ENST00000402250 217 ntBASIC4.85□□□□□ -1.63
PDLIM1O00151 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.85□□□□□ -1.63
PDLIM1O00151 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.85□□□□□ -1.63
PDLIM1O00151 PDSS1P1-201ENST00000422953 1114 ntBASIC4.85□□□□□ -1.63
PDLIM1O00151 HMGB3P10-201ENST00000434734 572 ntBASIC4.85□□□□□ -1.63
PDLIM1O00151 MAPRE1P3-201ENST00000435438 796 ntBASIC4.85□□□□□ -1.63
PDLIM1O00151 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.85□□□□□ -1.63
PDLIM1O00151 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.85□□□□□ -1.63
PDLIM1O00151 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.85□□□□□ -1.63
PDLIM1O00151 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.85□□□□□ -1.63
PDLIM1O00151 RSL24D1P2-201ENST00000445584 366 ntBASIC4.85□□□□□ -1.63
PDLIM1O00151 AL162388.1-201ENST00000450912 352 ntBASIC4.85□□□□□ -1.63
PDLIM1O00151 AL356981.1-201ENST00000454879 684 ntBASIC4.85□□□□□ -1.63
PDLIM1O00151 AL356390.1-201ENST00000455684 397 ntBASIC4.85□□□□□ -1.63
PDLIM1O00151 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.85□□□□□ -1.63
PDLIM1O00151 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.85□□□□□ -1.63
PDLIM1O00151 RN7SL189P-201ENST00000468631 289 ntBASIC4.85□□□□□ -1.63
PDLIM1O00151 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM1O00151 AC108693.1-201ENST00000496068 432 ntBASIC4.85□□□□□ -1.63
PDLIM1O00151 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.85□□□□□ -1.63
PDLIM1O00151 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM1O00151 SNORA48.9-201ENST00000516419 162 ntBASIC4.85□□□□□ -1.63
PDLIM1O00151 IGKV2-18-201ENST00000522607 343 ntBASIC4.85□□□□□ -1.63
PDLIM1O00151 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.85□□□□□ -1.63
PDLIM1O00151 AC005000.1-201ENST00000536192 288 ntBASIC4.85□□□□□ -1.63
PDLIM1O00151 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms