Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL606537.1-201ENST00000607258 2011 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC188H7C350 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC188H7C350 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC188H7C350 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC188H7C350 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC188H7C350 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC188H7C350 VPS35P1-201ENST00000563400 1518 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 AC017002.4-201ENST00000604721 1525 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 AL121950.1-201ENST00000624993 2077 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC188H7C350 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC188H7C350 AC235565.1-201ENST00000456962 1325 ntBASIC5.22□□□□□ -1.57
CCDC188H7C350 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC188H7C350 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC188H7C350 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC188H7C350 AP000542.2-201ENST00000623199 6179 ntBASIC5.21□□□□□ -1.57
CCDC188H7C350 AC019072.1-201ENST00000604535 1551 ntBASIC5.21□□□□□ -1.57
CCDC188H7C350 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CCDC188H7C350 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CCDC188H7C350 RNU6-249P-201ENST00000363016 102 ntBASIC5.21□□□□□ -1.58
CCDC188H7C350 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC188H7C350 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC188H7C350 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CCDC188H7C350 AL592291.1-201ENST00000403830 352 ntBASIC5.21□□□□□ -1.58
CCDC188H7C350 SNORA77-201ENST00000408716 125 ntBASIC5.21□□□□□ -1.58
CCDC188H7C350 AL390774.1-201ENST00000411924 246 ntBASIC5.21□□□□□ -1.58
CCDC188H7C350 AL133325.1-201ENST00000421090 382 ntBASIC5.21□□□□□ -1.58
CCDC188H7C350 OR6K4P-201ENST00000423179 955 ntBASIC5.21□□□□□ -1.58
CCDC188H7C350 AC092162.1-201ENST00000432828 434 ntBASIC5.21□□□□□ -1.58
CCDC188H7C350 AC073052.1-201ENST00000440417 714 ntBASIC5.21□□□□□ -1.58
CCDC188H7C350 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC188H7C350 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC188H7C350 CALM1P2-201ENST00000452941 448 ntBASIC5.21□□□□□ -1.58
CCDC188H7C350 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC188H7C350 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC188H7C350 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC188H7C350 AC007688.1-201ENST00000475592 759 ntBASIC5.21□□□□□ -1.58
CCDC188H7C350 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC188H7C350 MTCO1P31-201ENST00000506355 492 ntBASIC5.21□□□□□ -1.58
CCDC188H7C350 RNA5SP464-201ENST00000516251 108 ntBASIC5.21□□□□□ -1.58
CCDC188H7C350 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC188H7C350 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC188H7C350 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC188H7C350 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CCDC188H7C350 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC188H7C350 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC188H7C350 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC188H7C350 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC188H7C350 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC188H7C350 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC188H7C350 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC188H7C350 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC188H7C350 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC188H7C350 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC188H7C350 FO393422.1-201ENST00000603908 708 ntBASIC5.21□□□□□ -1.58
CCDC188H7C350 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC188H7C350 AC021106.3-201ENST00000623925 531 ntBASIC5.21□□□□□ -1.58
CCDC188H7C350 CYP4F35P-202ENST00000636121 390 ntBASIC5.21□□□□□ -1.58
CCDC188H7C350 SAMMSON-209ENST00000641222 1100 ntBASIC5.21□□□□□ -1.58
CCDC188H7C350 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CCDC188H7C350 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC188H7C350 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC188H7C350 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC188H7C350 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC188H7C350 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC188H7C350 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC188H7C350 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC188H7C350 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CCDC188H7C350 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC188H7C350 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC188H7C350 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CCDC188H7C350 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC188H7C350 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC188H7C350 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC188H7C350 KARSP1-201ENST00000451871 1752 ntBASIC5.2□□□□□ -1.58
CCDC188H7C350 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC188H7C350 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC188H7C350 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC188H7C350 RNU6-31P-201ENST00000384388 108 ntBASIC5.2□□□□□ -1.58
CCDC188H7C350 ATP5HP3-201ENST00000396994 486 ntBASIC5.2□□□□□ -1.58
CCDC188H7C350 EI24P3-201ENST00000399046 1062 ntBASIC5.2□□□□□ -1.58
CCDC188H7C350 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC188H7C350 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC188H7C350 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.2□□□□□ -1.58
CCDC188H7C350 RPS26P2-201ENST00000440331 348 ntBASIC5.2□□□□□ -1.58
CCDC188H7C350 AC064862.4-201ENST00000442180 334 ntBASIC5.2□□□□□ -1.58
CCDC188H7C350 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
CCDC188H7C350 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC188H7C350 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC188H7C350 NDUFA5P5-201ENST00000468361 342 ntBASIC5.2□□□□□ -1.58
CCDC188H7C350 RPL35AP19-201ENST00000469425 329 ntBASIC5.2□□□□□ -1.58
CCDC188H7C350 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC188H7C350 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC188H7C350 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC188H7C350 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC188H7C350 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC188H7C350 AC125612.1-201ENST00000547580 377 ntBASIC5.2□□□□□ -1.58
CCDC188H7C350 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC188H7C350 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms