Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 SEPT7P3-201ENST00000455017 621 ntBASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC114982.2-201ENST00000461396 358 ntBASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL591473.1-201ENST00000464297 313 ntBASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC097173.1-201ENST00000505862 819 ntBASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC006349.1-201ENST00000555526 235 ntBASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 ELOCP28-201ENST00000590044 317 ntBASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL512782.1-201ENST00000603093 364 ntBASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL353600.1-201ENST00000608148 251 ntBASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL672167.1-203ENST00000641299 2975 ntBASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC063976.2-201ENST00000425667 3556 ntBASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 RNA5SP223-201ENST00000365174 120 ntBASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 DNAJC19P7-201ENST00000428811 344 ntBASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC046176.1-201ENST00000435260 1170 ntBASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC011753.3-201ENST00000443436 406 ntBASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 SLC25A18P1-201ENST00000449385 454 ntBASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC063943.1-201ENST00000465434 453 ntBASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 NDUFA5P9-201ENST00000472609 340 ntBASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 ENPP7P9-201ENST00000514456 627 ntBASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 RNA5SP303-201ENST00000516192 130 ntBASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 TVP23CP2-201ENST00000571473 623 ntBASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 TTC39DP-201ENST00000416781 1688 ntBASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 AP001273.1-201ENST00000624493 3152 ntBASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC006971.1-201ENST00000407916 4486 ntBASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TMX2-CTNND1H3BSU7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 SOCS5P3-201ENST00000425115 1576 ntBASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 SAMMSON-213ENST00000641336 1521 ntBASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC079741.1-201ENST00000321498 212 ntBASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 HMGB3P7-201ENST00000400214 611 ntBASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL136116.2-201ENST00000404020 785 ntBASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 RNA5SP113-201ENST00000410486 84 ntBASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC009238.2-201ENST00000431026 355 ntBASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 RPS26P4-201ENST00000431743 355 ntBASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 RPL7P11-201ENST00000437586 658 ntBASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC004980.3-201ENST00000447046 365 ntBASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 OR1H1P-201ENST00000448731 937 ntBASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC073264.2-201ENST00000448886 166 ntBASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL356390.1-201ENST00000455684 397 ntBASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 NDUFA12P1-201ENST00000455914 406 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms