Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 ARAFP2-201ENST00000440565 559 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 OR7E125P-201ENST00000443450 846 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 RHEBP2-201ENST00000450289 600 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 AC005008.1-201ENST00000456151 612 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 EIF2S2P5-201ENST00000457635 968 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 SEPT14P1-201ENST00000458703 648 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 AC005532.2-201ENST00000467154 373 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 RN7SL177P-201ENST00000476596 299 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 COX6B1P5-201ENST00000509843 249 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 RN7SKP66-201ENST00000516681 231 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 OR7E128P-201ENST00000532736 1024 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 AC005868.1-201ENST00000536421 331 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 OR11J2P-201ENST00000555298 907 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 CYCSP40-201ENST00000575927 294 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 AP005901.4-201ENST00000577336 569 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 SCN1A-220ENST00000641603 12506 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 AC108751.5-201ENST00000492880 1336 ntBASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 RNA5SP305-201ENST00000362665 119 ntBASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 SNORA66-201ENST00000384792 133 ntBASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 AL592291.1-201ENST00000403830 352 ntBASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 AL139039.2-201ENST00000407436 479 ntBASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 MTCO3P17-201ENST00000443775 513 ntBASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 RN7SL799P-201ENST00000475891 298 ntBASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 AC074386.1-201ENST00000476560 767 ntBASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 AC090114.3-201ENST00000479267 829 ntBASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 RN7SL817P-201ENST00000480777 288 ntBASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 RPS4XP14-201ENST00000493072 781 ntBASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 STMN1P2-201ENST00000508435 439 ntBASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 RNA5SP360-201ENST00000516555 118 ntBASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 RPL21P7-201ENST00000557463 483 ntBASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 AC105254.2-201ENST00000603636 436 ntBASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 AC074140.1-201ENST00000621617 208 ntBASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 AP002799.1-201ENST00000623552 423 ntBASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 AC092111.2-201ENST00000611627 1414 ntBASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 CASC19-206ENST00000641028 1430 ntBASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRAPPC4Q9Y296 AC093909.5-201ENST00000621839 1799 ntBASIC4.53□□□□□ -1.69
TRAPPC4Q9Y296 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.69
TRAPPC4Q9Y296 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.69
TRAPPC4Q9Y296 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.53□□□□□ -1.69
TRAPPC4Q9Y296 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 C4BPAP1-201ENST00000415474 1893 ntBASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 TTC39DP-201ENST00000416781 1688 ntBASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 SNORA77-201ENST00000408716 125 ntBASIC4.52□□□□□ -1.69
TRAPPC4Q9Y296 RPL21P108-201ENST00000413857 481 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms