Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 DRG1-207ENST00000629688 309 ntTSL 5 BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 AC073488.2-201ENST00000631903 751 ntBASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 AC003985.2-201ENST00000562268 1669 ntBASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 AL133243.4-201ENST00000623116 3109 ntBASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
ZC3H4Q9UPT8 AL669831.5-218ENST00000591702 1873 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 RNU6-543P-201ENST00000362576 108 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 Y_RNA.160-201ENST00000363677 92 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 AL672167.2-201ENST00000377164 879 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 RNU6-692P-201ENST00000384496 107 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 Y_RNA.509-201ENST00000384506 99 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 MIR143-201ENST00000385300 106 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 AC013404.1-201ENST00000413068 249 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 OFD1P12Y-201ENST00000427963 1207 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 ZYG11AP1-201ENST00000430329 837 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 AL022238.1-201ENST00000442557 355 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 AC093019.1-201ENST00000443135 252 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 AP000797.1-201ENST00000478870 387 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 NDUFA5P12-201ENST00000503796 343 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 AC117522.3-201ENST00000507974 584 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 AC083923.1-201ENST00000523708 376 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 AL391840.1-201ENST00000571144 367 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 AC107214.2-201ENST00000608204 634 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 STMN1P1-201ENST00000617809 440 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 AC241584.2-201ENST00000637142 2090 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 AL031651.1-201ENST00000615357 1438 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 MAPK10-383ENST00000642032 3390 ntBASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC8.05□□□□□ -1.12
ZC3H4Q9UPT8 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 ATM-215ENST00000530958 5718 ntTSL 2 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 Y_RNA.296-201ENST00000364930 108 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms