Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 BNIP3P9-201ENST00000603714 553 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 TAS2R6P-201ENST00000605022 826 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC002553.4-201ENST00000616896 331 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 pRNA.9-201ENST00000618609 89 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 BX005040.2-201ENST00000620504 370 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC138649.3-201ENST00000622154 254 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 AP000648.2-201ENST00000624182 404 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 HBG1-202ENST00000632727 369 ntTSL 3 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AL033543.1-201ENST00000623440 13454 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SSU72Q9NP77 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SSU72Q9NP77 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSU72Q9NP77 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSU72Q9NP77 MTND4P12-201ENST00000498999 1377 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSU72Q9NP77 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSU72Q9NP77 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSU72Q9NP77 MSL3P1-202ENST00000440028 1468 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 HMGB1P5-201ENST00000255320 642 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 AC023886.2-201ENST00000321285 411 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 RNU6-433P-201ENST00000363216 104 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 RNU6-501P-201ENST00000364072 100 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 RNU6-452P-201ENST00000384406 107 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 RNA5SP35-201ENST00000391257 129 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 RPL5P20-201ENST00000403848 896 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 CCNG1P1-201ENST00000406783 885 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 AC015977.1-201ENST00000418887 292 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 AL139413.1-201ENST00000421309 217 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 AC093084.1-201ENST00000424233 687 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 SNRPBP1-201ENST00000443634 282 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 RN7SL492P-201ENST00000460700 295 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 AP000852.1-201ENST00000472460 573 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 HMGN1P10-201ENST00000474557 553 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 AC128716.1-201ENST00000475129 166 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 AC079382.1-201ENST00000493346 557 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSU72Q9NP77 AC131392.1-201ENST00000506490 633 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 AC093824.1-201ENST00000508796 343 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 AC106800.3-201ENST00000511389 308 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 AP002453.2-201ENST00000533503 320 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 AP001804.2-201ENST00000533932 910 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSU72Q9NP77 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSU72Q9NP77 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 AC044792.1-201ENST00000593294 196 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 AC078795.3-201ENST00000602913 472 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 AC091133.5-201ENST00000603088 301 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 AC006840.1-201ENST00000623069 542 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 AC124864.2-201ENST00000624736 186 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 AL359697.1-201ENST00000624879 587 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 AC140479.4-205ENST00000636339 820 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 MTND1P37-201ENST00000636562 264 ntBASIC6.42□□□□□ -1.38
SSU72Q9NP77 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSU72Q9NP77 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSU72Q9NP77 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSU72Q9NP77 MTND4P16-201ENST00000466108 1367 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms