Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
TM9SF3Q9HD45 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TM9SF3Q9HD45 AL356317.1-201ENST00000396110 1436 ntBASIC5.15□□□□□ -1.58
TM9SF3Q9HD45 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
TM9SF3Q9HD45 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TM9SF3Q9HD45 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.15□□□□□ -1.58
TM9SF3Q9HD45 RN7SKP95-201ENST00000362860 303 ntBASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 RN7SKP149-201ENST00000363008 344 ntBASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 RNA5SP90-201ENST00000364801 99 ntBASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 OR1L6-202ENST00000373684 1044 ntBASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 AC093084.1-201ENST00000424233 687 ntBASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 AC090804.1-201ENST00000448870 490 ntBASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 OR6C72P-201ENST00000451403 892 ntBASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 MTCYBP13-201ENST00000578634 1093 ntBASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 ELOCP28-201ENST00000590044 317 ntBASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 AC108738.1-201ENST00000603703 237 ntBASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 uc_338.18-201ENST00000615451 175 ntBASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 AC105105.5-201ENST00000622635 1294 ntBASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 MTCO1P1-201ENST00000624263 1081 ntBASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 OR10AB1P-202ENST00000641219 1686 ntBASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TM9SF3Q9HD45 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 IRF5P1-201ENST00000504852 2164 ntBASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 RNA5SP87-201ENST00000384155 118 ntBASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 OR8V1P-201ENST00000395193 873 ntBASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 FAR2P2-201ENST00000413041 594 ntBASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 COX5BP7-201ENST00000414780 274 ntBASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 CHEK2P3-201ENST00000416118 248 ntBASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 FAR2P4-202ENST00000425399 584 ntBASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 HMGB1P32-201ENST00000425971 565 ntBASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 RPL19P16-201ENST00000433839 588 ntBASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 RHOT1P3-201ENST00000436571 331 ntBASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 FHP1-201ENST00000442741 703 ntBASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 KNOP1P3-201ENST00000446933 426 ntBASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 RPS29P33-201ENST00000456717 146 ntBASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 IGLV2-34-201ENST00000490007 283 ntBASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 AC040958.1-201ENST00000561102 201 ntBASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 AC127024.5-201ENST00000580085 462 ntBASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms