Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 AC008549.2-201ENST00000333482 706 ntBASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 RNA5SP428-201ENST00000365129 132 ntBASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 MIR23A-201ENST00000385245 73 ntBASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 AL136116.2-201ENST00000404020 785 ntBASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 TBCAP2-201ENST00000416175 326 ntBASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 RPL36AP10-201ENST00000421785 322 ntBASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 CKS1BP6-201ENST00000424932 240 ntBASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 AL360081.1-201ENST00000428299 555 ntBASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 RPS29P33-201ENST00000456717 146 ntBASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 AC092324.1-201ENST00000468671 324 ntBASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 IGKV2D-10-201ENST00000520194 281 ntBASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 AC011447.4-201ENST00000587562 111 ntBASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 MEMO1P5-201ENST00000604810 406 ntBASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 OR4G1P-202ENST00000641173 1788 ntBASIC5.83□□□□□ -1.48
UPF3BQ9BZI7 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 RPS3AP53-201ENST00000454716 778 ntBASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 RN7SL517P-201ENST00000462240 305 ntBASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 TOMM20P2-201ENST00000540082 421 ntBASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 AC092490.3-201ENST00000545370 572 ntBASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 AC018552.1-201ENST00000562099 811 ntBASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 AC006272.2-201ENST00000594725 163 ntBASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 AL122125.1-201ENST00000616999 600 ntBASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 AC019206.1-201ENST00000621938 425 ntBASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 AC012414.7-202ENST00000622705 1090 ntBASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 AC083843.2-201ENST00000568248 6253 ntBASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 PROS2P-201ENST00000474651 1951 ntBASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.82□□□□□ -1.48
UPF3BQ9BZI7 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 THAP12P4-201ENST00000528321 2266 ntBASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 GJA6P-201ENST00000415117 1042 ntBASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 EIF4HP2-201ENST00000424380 563 ntBASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 AC092162.1-201ENST00000432828 434 ntBASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 AL138878.2-201ENST00000440581 1241 ntBASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 AL137845.2-201ENST00000444292 988 ntBASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 RN7SL244P-201ENST00000493405 297 ntBASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 AC105233.1-201ENST00000498840 781 ntBASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 AC004980.4-201ENST00000513375 203 ntBASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 AC068993.1-201ENST00000546724 589 ntBASIC5.81□□□□□ -1.48
UPF3BQ9BZI7 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms