Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC106782.4-201ENST00000568264 210 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 MIR4327-201ENST00000581194 85 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 MTND4LP5-201ENST00000605152 292 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 PRYP3-202ENST00000607210 444 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 DUSP12P1-201ENST00000612874 516 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 FTX_2.1-201ENST00000618816 94 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC008937.3-201ENST00000606813 1700 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 TMCC1P1-201ENST00000518897 1980 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 LINC00837-201ENST00000443246 3991 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC235565.1-201ENST00000456962 1325 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 UIMC1-211ENST00000510698 1334 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AKAP10-202ENST00000395536 1815 ntTSL 5 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 SMARCA2-263ENST00000637806 7061 ntTSL 5 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 AC105342.1-201ENST00000378334 6848 ntBASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 MAPK10-290ENST00000641237 2826 ntBASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 SALL1P1-201ENST00000438101 3837 ntBASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 AC134882.1-201ENST00000603738 1676 ntBASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 AL365475.1-201ENST00000565135 1949 ntBASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 PIGA-201ENST00000333590 3652 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 AC016582.1-201ENST00000592640 1716 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 EIF4BP2-201ENST00000416702 1794 ntBASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 LINC00955-202ENST00000514422 1502 ntTSL 4 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 TGIF2LY-201ENST00000321217 905 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 SMIM7-201ENST00000358726 850 ntTSL 2 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 S100A8-202ENST00000368733 523 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 BPIFA3-202ENST00000375454 1116 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 IGKV1D-12-201ENST00000377032 371 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 MRPS6P2-201ENST00000381143 370 ntBASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 MIR671-201ENST00000390183 118 ntBASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 AP002761.1-201ENST00000400985 262 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 RNU6-387P-201ENST00000411331 105 ntBASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 HMGN1P24-201ENST00000412282 298 ntBASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 CCDC144NL-AS1-202ENST00000423473 839 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 VOPP1-205ENST00000427700 632 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 Z74696.1-201ENST00000428208 1123 ntBASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 RPL37P1-201ENST00000432310 284 ntBASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.13□□□□□ -1.75
KRTAP3-1Q9BYR8 AC096775.1-201ENST00000437724 448 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms