Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 ATP8A2P3-201ENST00000426792 1536 ntBASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 CR383658.2-201ENST00000547576 1525 ntBASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 PANDAR-201ENST00000629595 1506 ntBASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 LCOR-201ENST00000286067 4542 ntBASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 MTND5P24-201ENST00000438892 1767 ntBASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 OR4A15-201ENST00000314706 1035 ntBASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 SNRPEP3-201ENST00000338402 276 ntBASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 RNU6-660P-201ENST00000364566 109 ntBASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AL450338.1-201ENST00000407987 512 ntBASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 OR6C64P-201ENST00000419708 825 ntBASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AL953862.1-201ENST00000423016 168 ntBASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 YWHAZP8-201ENST00000436935 731 ntBASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 BMS1P10-201ENST00000443754 1120 ntBASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AC234771.2-201ENST00000445718 597 ntBASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 LAMTOR3P2-201ENST00000504479 232 ntBASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 DEFB131D-201ENST00000526803 184 ntBASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 MIR5186-201ENST00000577504 120 ntBASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 MIR3611-201ENST00000584484 83 ntBASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AC110743.1-201ENST00000584870 478 ntBASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AC107982.3-201ENST00000584957 985 ntBASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AC104785.1-201ENST00000603220 588 ntBASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AC068276.1-201ENST00000605793 379 ntBASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AC096992.2-201ENST00000609553 1684 ntBASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 AP000866.6-201ENST00000638898 3579 ntBASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRAIPQ9BWF2 LINC00561-201ENST00000565815 2738 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AL355377.1-201ENST00000621125 1653 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 MTCO1P23-201ENST00000415223 1526 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 RNU6-462P-201ENST00000362659 105 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AL359694.1-201ENST00000403247 604 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 RNA5SP198-201ENST00000410376 127 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AC092647.1-201ENST00000420654 287 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 MTCO2P34-201ENST00000421994 607 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AC096632.1-201ENST00000427395 310 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AC239367.3-201ENST00000428996 814 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AC069154.1-201ENST00000432914 542 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AC023347.2-201ENST00000433994 462 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms