Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC007993.1-201ENST00000621298 2430 ntBASIC7.9□□□□□ -1.15
TRIM47Q96LD4 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.15
TRIM47Q96LD4 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.9□□□□□ -1.15
TRIM47Q96LD4 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.15
TRIM47Q96LD4 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.9□□□□□ -1.15
TRIM47Q96LD4 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.9□□□□□ -1.15
TRIM47Q96LD4 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.15
TRIM47Q96LD4 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 MARK2P4-201ENST00000503381 2380 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 SAMM50P1-201ENST00000455403 1399 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 DCAF13P1-201ENST00000495256 1330 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 OR4K15-201ENST00000305051 1216 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 AC011155.1-201ENST00000316512 456 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 RNU6-1309P-201ENST00000363305 108 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 AL353625.1-202ENST00000366273 571 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 RN7SKP62-201ENST00000384539 329 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 RNU6-932P-201ENST00000391108 106 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 TANK-203ENST00000402568 878 ntTSL 5 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 RSU1P3-201ENST00000412878 835 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 USP9YP27-201ENST00000418455 438 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 CBX3P6-201ENST00000430257 527 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 ATP5F1P1-201ENST00000433775 569 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 H3F3AP5-201ENST00000475267 429 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 RNU6-406P-201ENST00000516470 107 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 AL157687.1-201ENST00000554853 619 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 AC243756.2-201ENST00000618406 463 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 AL133370.2-201ENST00000619934 439 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 AC006065.6-201ENST00000625201 545 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 AC009237.3-203ENST00000442128 3551 ntBASIC7.89□□□□□ -1.15
TRIM47Q96LD4 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM47Q96LD4 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 AL353743.4-201ENST00000422653 1547 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 AC092821.2-201ENST00000545710 2042 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 ZNF90P1-201ENST00000480493 1951 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 SNORD81.2-201ENST00000365153 76 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 MRPS21P5-201ENST00000417885 231 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 RPL21P43-201ENST00000425440 472 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 AL358176.2-201ENST00000425769 204 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 SDAD1P3-201ENST00000427380 333 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 AC104843.2-201ENST00000427666 297 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 TIMM9P3-201ENST00000428659 274 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 ARL5AP3-201ENST00000439327 386 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 SDHCP3-201ENST00000445371 506 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 AC010301.1-201ENST00000473936 355 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 RPS14P8-201ENST00000478778 369 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 RN7SL214P-201ENST00000487317 265 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms