Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 CU639417.4-201ENST00000623928 207 ntBASIC6.1□□□□□ -1.43
HPS3Q969F9 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HPS3Q969F9 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HPS3Q969F9 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HPS3Q969F9 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HPS3Q969F9 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HPS3Q969F9 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
HPS3Q969F9 RLIMP2-201ENST00000427891 1563 ntBASIC6.1□□□□□ -1.43
HPS3Q969F9 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HPS3Q969F9 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.1□□□□□ -1.43
HPS3Q969F9 AC083899.1-201ENST00000454465 3819 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 ABCC13-202ENST00000463099 3842 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
HPS3Q969F9 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.09□□□□□ -1.43
HPS3Q969F9 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HPS3Q969F9 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HPS3Q969F9 AC079097.1-201ENST00000512187 1399 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HPS3Q969F9 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HPS3Q969F9 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HPS3Q969F9 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HPS3Q969F9 AC007618.1-201ENST00000366455 732 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.09□□□□□ -1.43
HPS3Q969F9 RNU6-932P-201ENST00000391108 106 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
HPS3Q969F9 RPS27AP11-201ENST00000402798 447 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 RPL5P19-201ENST00000404228 893 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 HMGB3P31-201ENST00000413333 595 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 RPL34P3-201ENST00000421454 338 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 RIMKLBP2-201ENST00000424737 654 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.09□□□□□ -1.43
HPS3Q969F9 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.09□□□□□ -1.43
HPS3Q969F9 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.09□□□□□ -1.43
HPS3Q969F9 OSTCP5-201ENST00000425293 453 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 RPS4XP16-201ENST00000427198 791 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.09□□□□□ -1.43
HPS3Q969F9 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.09□□□□□ -1.43
HPS3Q969F9 MTCYBP15-201ENST00000433123 1127 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.09□□□□□ -1.43
HPS3Q969F9 AL359265.1-201ENST00000440296 795 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC6.09□□□□□ -1.43
HPS3Q969F9 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC6.09□□□□□ -1.43
HPS3Q969F9 AC073465.2-201ENST00000440938 498 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 TPTE2P3-201ENST00000441562 1189 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 AC023271.1-201ENST00000445936 1090 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HPS3Q969F9 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HPS3Q969F9 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.09□□□□□ -1.43
HPS3Q969F9 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.09□□□□□ -1.43
HPS3Q969F9 RN7SL197P-201ENST00000466981 299 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.09□□□□□ -1.43
HPS3Q969F9 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.09□□□□□ -1.43
HPS3Q969F9 AC091912.1-201ENST00000511351 248 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 AC074087.1-201ENST00000512059 724 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.09□□□□□ -1.43
HPS3Q969F9 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.09□□□□□ -1.43
HPS3Q969F9 Y_RNA.717-201ENST00000517106 92 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.09□□□□□ -1.43
HPS3Q969F9 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.09□□□□□ -1.43
HPS3Q969F9 AC020937.1-201ENST00000519677 1013 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.09□□□□□ -1.43
HPS3Q969F9 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.09□□□□□ -1.43
HPS3Q969F9 OR11H3P-201ENST00000554547 982 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.09□□□□□ -1.43
HPS3Q969F9 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.09□□□□□ -1.43
HPS3Q969F9 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.09□□□□□ -1.43
HPS3Q969F9 AC010547.6-201ENST00000571789 193 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 AC027455.1-201ENST00000574104 594 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.09□□□□□ -1.43
HPS3Q969F9 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.09□□□□□ -1.43
HPS3Q969F9 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.09□□□□□ -1.43
HPS3Q969F9 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HPS3Q969F9 Z95327.3-201ENST00000610385 572 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC6.09□□□□□ -1.43
HPS3Q969F9 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 AC135068.5-201ENST00000624197 983 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.43
HPS3Q969F9 AC103703.1-201ENST00000634783 663 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 OR6C71P-202ENST00000641886 1107 ntBASIC6.09□□□□□ -1.43
HPS3Q969F9 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HPS3Q969F9 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HPS3Q969F9 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.09□□□□□ -1.43
HPS3Q969F9 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HPS3Q969F9 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.09□□□□□ -1.44
HPS3Q969F9 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
HPS3Q969F9 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.09□□□□□ -1.44
HPS3Q969F9 MTCO1P11-201ENST00000429111 1528 ntBASIC6.09□□□□□ -1.44
HPS3Q969F9 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.09□□□□□ -1.44
HPS3Q969F9 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
HPS3Q969F9 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.09□□□□□ -1.44
HPS3Q969F9 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.44
HPS3Q969F9 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HPS3Q969F9 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.08□□□□□ -1.44
HPS3Q969F9 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.08□□□□□ -1.44
HPS3Q969F9 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
HPS3Q969F9 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HPS3Q969F9 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HPS3Q969F9 OR9K1P-202ENST00000641111 3217 ntBASIC6.08□□□□□ -1.44
HPS3Q969F9 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HPS3Q969F9 METTL21EP-201ENST00000298105 713 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms