Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 HSPA8P18-201ENST00000439846 1928 ntBASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 RNA5SP326-201ENST00000363209 110 ntBASIC5.49□□□□□ -1.53
HMGB4Q8WW32 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 MTCO3P4-201ENST00000419236 787 ntBASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AC093162.1-201ENST00000419682 124 ntBASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AC007161.1-204ENST00000423039 460 ntBASIC5.49□□□□□ -1.53
HMGB4Q8WW32 OR6K4P-201ENST00000423179 955 ntBASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 FO393419.3-201ENST00000428741 282 ntBASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 NANOGP9-201ENST00000439890 892 ntBASIC5.49□□□□□ -1.53
HMGB4Q8WW32 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AL596266.1-201ENST00000448132 400 ntBASIC5.49□□□□□ -1.53
HMGB4Q8WW32 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AL096803.2-201ENST00000450032 677 ntBASIC5.49□□□□□ -1.53
HMGB4Q8WW32 snoU13.29-201ENST00000459370 104 ntBASIC5.49□□□□□ -1.53
HMGB4Q8WW32 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 HMGB1P44-201ENST00000508597 572 ntBASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AP000676.2-201ENST00000529711 301 ntBASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AC114947.2-201ENST00000565748 2125 ntBASIC5.49□□□□□ -1.53
HMGB4Q8WW32 H3F3BP2-201ENST00000583907 357 ntBASIC5.49□□□□□ -1.53
HMGB4Q8WW32 MIR4420-201ENST00000583944 77 ntBASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AC008147.4-201ENST00000617570 1204 ntBASIC5.49□□□□□ -1.53
HMGB4Q8WW32 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AL590396.4-201ENST00000636779 956 ntBASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AP000550.3-201ENST00000637734 379 ntBASIC5.49□□□□□ -1.53
HMGB4Q8WW32 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AL132640.2-201ENST00000559968 1698 ntBASIC5.49□□□□□ -1.53
HMGB4Q8WW32 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 AC023421.1-201ENST00000590535 1785 ntBASIC5.49□□□□□ -1.53
HMGB4Q8WW32 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB4Q8WW32 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 RPL11P3-201ENST00000395256 523 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 OR4K12P-201ENST00000406538 961 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 U3.36-201ENST00000408418 213 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 RPSAP35-201ENST00000413753 818 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 AC093655.2-201ENST00000425735 631 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 AC092651.1-201ENST00000426110 312 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 DPY19L1P2-201ENST00000426647 915 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 USP12PY-201ENST00000427677 1064 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 ETF1P3-201ENST00000430422 1160 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 CACYBPP1-201ENST00000438592 684 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGB4Q8WW32 YWHAZP2-201ENST00000440317 728 ntBASIC5.48□□□□□ -1.53
HMGB4Q8WW32 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms