Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SNED1Q8TER0 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.83□□□□□ -1.48
SNED1Q8TER0 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.83□□□□□ -1.48
SNED1Q8TER0 AL020997.2-201ENST00000602607 184 ntBASIC5.83□□□□□ -1.48
SNED1Q8TER0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.83□□□□□ -1.48
SNED1Q8TER0 AL121932.1-201ENST00000605542 214 ntBASIC5.83□□□□□ -1.48
SNED1Q8TER0 AC018695.5-201ENST00000605872 315 ntBASIC5.83□□□□□ -1.48
SNED1Q8TER0 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNED1Q8TER0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.83□□□□□ -1.48
SNED1Q8TER0 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.83□□□□□ -1.48
SNED1Q8TER0 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNED1Q8TER0 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SNED1Q8TER0 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SNED1Q8TER0 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNED1Q8TER0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.83□□□□□ -1.48
SNED1Q8TER0 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SNED1Q8TER0 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNED1Q8TER0 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNED1Q8TER0 AC120338.1-201ENST00000625074 1541 ntBASIC5.83□□□□□ -1.48
SNED1Q8TER0 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SNED1Q8TER0 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNED1Q8TER0 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SNED1Q8TER0 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SNED1Q8TER0 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SNED1Q8TER0 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.83□□□□□ -1.48
SNED1Q8TER0 OR4K17-201ENST00000315543 1032 ntBASIC5.82□□□□□ -1.48
SNED1Q8TER0 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SNED1Q8TER0 AC079809.1-201ENST00000415468 276 ntBASIC5.82□□□□□ -1.48
SNED1Q8TER0 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SNED1Q8TER0 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 RPL7P32-201ENST00000457119 744 ntBASIC5.82□□□□□ -1.48
SNED1Q8TER0 RPL23AP24-201ENST00000458203 385 ntBASIC5.82□□□□□ -1.48
SNED1Q8TER0 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNED1Q8TER0 AC097486.1-201ENST00000515331 210 ntBASIC5.82□□□□□ -1.48
SNED1Q8TER0 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 RNF138P2-201ENST00000603490 592 ntBASIC5.82□□□□□ -1.48
SNED1Q8TER0 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNED1Q8TER0 AL049536.1-201ENST00000625043 744 ntBASIC5.82□□□□□ -1.48
SNED1Q8TER0 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNED1Q8TER0 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNED1Q8TER0 AC025574.1-201ENST00000554784 1653 ntBASIC5.82□□□□□ -1.48
SNED1Q8TER0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNED1Q8TER0 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SNED1Q8TER0 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNED1Q8TER0 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SNED1Q8TER0 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.82□□□□□ -1.48
SNED1Q8TER0 BCORP1-203ENST00000513194 5093 ntBASIC5.82□□□□□ -1.48
SNED1Q8TER0 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNED1Q8TER0 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SNED1Q8TER0 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNED1Q8TER0 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNED1Q8TER0 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNED1Q8TER0 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNED1Q8TER0 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 TRIM51GP-201ENST00000534741 1350 ntBASIC5.82□□□□□ -1.48
SNED1Q8TER0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 RPS27AP12-201ENST00000429552 465 ntBASIC5.82□□□□□ -1.48
SNED1Q8TER0 AC004980.3-201ENST00000447046 365 ntBASIC5.82□□□□□ -1.48
SNED1Q8TER0 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 RN7SL558P-201ENST00000497468 299 ntBASIC5.82□□□□□ -1.48
SNED1Q8TER0 NIFKP7-201ENST00000503365 834 ntBASIC5.82□□□□□ -1.48
SNED1Q8TER0 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SNED1Q8TER0 AC093524.1-201ENST00000564266 1094 ntBASIC5.82□□□□□ -1.48
SNED1Q8TER0 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 VN1R85P-201ENST00000601587 426 ntBASIC5.82□□□□□ -1.48
SNED1Q8TER0 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.82□□□□□ -1.48
SNED1Q8TER0 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNED1Q8TER0 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNED1Q8TER0 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SNED1Q8TER0 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SNED1Q8TER0 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNED1Q8TER0 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.81□□□□□ -1.48
SNED1Q8TER0 TTC41P-205ENST00000551270 3963 ntBASIC5.81□□□□□ -1.48
SNED1Q8TER0 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
SNED1Q8TER0 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SNED1Q8TER0 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.81□□□□□ -1.48
SNED1Q8TER0 SOCS5P3-201ENST00000425115 1576 ntBASIC5.81□□□□□ -1.48
SNED1Q8TER0 AC104118.1-201ENST00000607625 1589 ntBASIC5.81□□□□□ -1.48
SNED1Q8TER0 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.81□□□□□ -1.48
SNED1Q8TER0 OR14L1P-202ENST00000641545 3009 ntBASIC5.81□□□□□ -1.48
SNED1Q8TER0 DNM1P47-203ENST00000571780 12667 ntBASIC5.81□□□□□ -1.48
SNED1Q8TER0 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms