Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 RPL5P25-201ENST00000441148 775 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC084754.1-201ENST00000463466 464 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 RN7SL269P-201ENST00000467795 305 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 CYCSP20-201ENST00000473154 315 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC074386.1-201ENST00000476560 767 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC124945.1-201ENST00000485133 188 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC104687.1-201ENST00000485829 412 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 CCDC11P1-201ENST00000503137 1162 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC107401.1-201ENST00000503426 685 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC011352.1-201ENST00000512300 793 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 CYP4F27P-201ENST00000514557 494 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 RPS27AP18-201ENST00000515536 459 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 RNA5SP340-201ENST00000517132 107 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC138832.1-201ENST00000522871 556 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC010306.1-201ENST00000523223 1117 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC244502.2-201ENST00000543361 851 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 MTND4P33-201ENST00000556706 766 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC103987.3-201ENST00000582071 292 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC006363.1-201ENST00000603806 463 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC073387.2-201ENST00000604797 784 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AL583856.2-201ENST00000606298 543 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC135507.1-201ENST00000607214 561 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC109309.2-201ENST00000612597 332 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC069234.4-201ENST00000621276 412 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AL136228.1-201ENST00000622221 319 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC104985.3-201ENST00000623479 597 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 MTND4P26-201ENST00000415971 1359 ntBASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 RNU6-249P-201ENST00000363016 102 ntBASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 Y_RNA.201-201ENST00000364052 96 ntBASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 BMS1P3-201ENST00000372011 932 ntBASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 AC004386.1-201ENST00000393214 761 ntBASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 SNRPEP6-201ENST00000407465 277 ntBASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 HMGN1P20-201ENST00000411849 300 ntBASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 BTF3L4P1-201ENST00000413813 468 ntBASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 LINC01347-201ENST00000417964 355 ntBASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 RPS7P8-201ENST00000418311 581 ntBASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 TIMM9P2-201ENST00000419324 266 ntBASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 RPS4XP16-201ENST00000427198 791 ntBASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 AC093422.3-201ENST00000428506 305 ntBASIC5.6□□□□□ -1.51
SIMC1Q8NDZ2 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms