Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.14□□□□□ -1.43
TMEFF1Q8IYR6 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
TMEFF1Q8IYR6 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
TMEFF1Q8IYR6 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TMEFF1Q8IYR6 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AC024651.2-201ENST00000562480 2098 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AC062029.1-202ENST00000606164 3651 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AL672167.1-206ENST00000356293 943 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 RNU1-87P-201ENST00000363727 170 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 RNU6-1011P-201ENST00000384668 107 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 RN7SKP33-201ENST00000410942 340 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 BX284632.2-201ENST00000421091 399 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AC097721.1-201ENST00000427150 1253 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AL512605.1-202ENST00000441919 381 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AP000281.1-201ENST00000444036 316 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AL359955.2-201ENST00000445380 353 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 ZNF619P1-201ENST00000446539 752 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AC114755.5-201ENST00000447760 831 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 CCRL1P1-201ENST00000449542 1053 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AC107015.1-201ENST00000466902 747 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AC092865.4-201ENST00000477936 615 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AC231760.1-201ENST00000498002 260 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 KRT19P6-201ENST00000510983 209 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 MTCYBP19-201ENST00000517463 1124 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 NPM1P6-201ENST00000521088 871 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AC009120.3-201ENST00000563335 499 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AC005034.5-201ENST00000604219 466 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 RNA5SP440-201ENST00000612665 119 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AC013476.2-201ENST00000614456 459 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AL445647.2-201ENST00000615170 130 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AC126177.8-201ENST00000618339 1015 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AC010435.1-201ENST00000623353 1177 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AC015726.3-201ENST00000624501 418 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 RBPJP7-201ENST00000442803 1447 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 RBPJP5-201ENST00000449433 1447 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 WDR95P-201ENST00000425638 1542 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 EPS15P1-202ENST00000459691 2071 ntBASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.13□□□□□ -1.43
TMEFF1Q8IYR6 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TMEFF1Q8IYR6 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.12□□□□□ -1.43
TMEFF1Q8IYR6 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TMEFF1Q8IYR6 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.12□□□□□ -1.43
TMEFF1Q8IYR6 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TMEFF1Q8IYR6 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TMEFF1Q8IYR6 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
TMEFF1Q8IYR6 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
TMEFF1Q8IYR6 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TMEFF1Q8IYR6 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TMEFF1Q8IYR6 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
TMEFF1Q8IYR6 RN7SKP115-201ENST00000363177 317 ntBASIC6.12□□□□□ -1.43
TMEFF1Q8IYR6 RN7SKP103-201ENST00000363848 320 ntBASIC6.12□□□□□ -1.43
TMEFF1Q8IYR6 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.12□□□□□ -1.43
TMEFF1Q8IYR6 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
TMEFF1Q8IYR6 SNORA40.2-201ENST00000390847 128 ntBASIC6.12□□□□□ -1.43
TMEFF1Q8IYR6 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.12□□□□□ -1.43
TMEFF1Q8IYR6 NXF4-202ENST00000416098 1465 ntBASIC6.12□□□□□ -1.43
TMEFF1Q8IYR6 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.12□□□□□ -1.43
TMEFF1Q8IYR6 RPL7P30-201ENST00000420888 709 ntBASIC6.12□□□□□ -1.43
TMEFF1Q8IYR6 OR6K4P-201ENST00000423179 955 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms