Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC007064.3-201ENST00000422608 359 ntBASIC4.79□□□□□ -1.64
CCDC71Q8IV32 AC093655.2-201ENST00000425735 631 ntBASIC4.79□□□□□ -1.64
CCDC71Q8IV32 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 RPL35AP21-201ENST00000437667 333 ntBASIC4.79□□□□□ -1.64
CCDC71Q8IV32 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 AC092647.3-201ENST00000443044 633 ntBASIC4.79□□□□□ -1.64
CCDC71Q8IV32 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 AC002553.2-201ENST00000453217 340 ntBASIC4.79□□□□□ -1.64
CCDC71Q8IV32 C1DP3-201ENST00000455013 423 ntBASIC4.79□□□□□ -1.64
CCDC71Q8IV32 NPM1P29-201ENST00000483112 803 ntBASIC4.79□□□□□ -1.64
CCDC71Q8IV32 AC022133.1-201ENST00000490961 571 ntBASIC4.79□□□□□ -1.64
CCDC71Q8IV32 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 RN7SL435P-201ENST00000584418 282 ntBASIC4.79□□□□□ -1.64
CCDC71Q8IV32 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 AC015871.5-202ENST00000623252 701 ntBASIC4.79□□□□□ -1.64
CCDC71Q8IV32 AL118508.4-201ENST00000624142 1176 ntBASIC4.79□□□□□ -1.64
CCDC71Q8IV32 LINC01739-205ENST00000641890 573 ntBASIC4.79□□□□□ -1.64
CCDC71Q8IV32 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.79□□□□□ -1.64
CCDC71Q8IV32 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 AC112255.1-201ENST00000624070 2493 ntBASIC4.79□□□□□ -1.64
CCDC71Q8IV32 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AC011447.7-201ENST00000624228 1590 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 CASC19-281ENST00000642118 1554 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 RNU6-697P-201ENST00000363348 107 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 RNU4-4P-201ENST00000364588 130 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 BMS1P3-201ENST00000372011 932 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 MIR7-1-201ENST00000384871 110 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AL359643.1-201ENST00000404109 423 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 RNA5SP487-201ENST00000410186 122 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 CBX1P3-201ENST00000413296 527 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 TRIM60P13-201ENST00000432350 1283 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AL450263.2-201ENST00000439400 589 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 BTBD7P2-201ENST00000441962 620 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AL672138.1-201ENST00000450604 1015 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AC009127.1-201ENST00000467090 155 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 OR52A4P-202ENST00000481634 799 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 HMGB3P16-201ENST00000508037 287 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 SNORA26.10-201ENST00000516427 141 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AP000676.2-201ENST00000529711 301 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AC005341.1-201ENST00000571086 708 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AC018695.5-201ENST00000605872 315 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AL021368.1-201ENST00000607490 540 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AL445528.2-201ENST00000620582 470 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 AC073342.3-201ENST00000624211 193 ntBASIC4.78□□□□□ -1.64
CCDC71Q8IV32 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC71Q8IV32 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms