Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.45□□□□□ -1.54
PRPF39Q86UA1 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.44□□□□□ -1.54
PRPF39Q86UA1 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PRPF39Q86UA1 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PRPF39Q86UA1 RNA5SP339-201ENST00000390987 122 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AL645927.1-201ENST00000396783 406 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 ATP5HP3-201ENST00000396994 486 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 UBE2V1P15-201ENST00000407776 448 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 RN7SKP273-201ENST00000411392 314 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AC108075.1-201ENST00000424692 529 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AC093655.2-201ENST00000425735 631 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.44□□□□□ -1.54
PRPF39Q86UA1 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.44□□□□□ -1.54
PRPF39Q86UA1 CLUHP1-201ENST00000435012 1190 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AC245047.2-201ENST00000441060 530 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 XKRY2-201ENST00000442362 1093 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 FHP1-201ENST00000442741 703 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 CEACAMP7-201ENST00000444105 496 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AC006326.1-201ENST00000445465 787 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 NPM1P39-201ENST00000449818 867 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AC243772.1-201ENST00000451620 410 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AC092691.2-201ENST00000461787 803 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 RN7SL329P-201ENST00000467740 299 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 RN7SL222P-201ENST00000476452 299 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 RPS18P6-201ENST00000476880 458 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 RPSAP50-201ENST00000481955 852 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AL049874.2-201ENST00000492636 288 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AC098976.1-201ENST00000513014 541 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 SETP12-201ENST00000514068 805 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.44□□□□□ -1.54
PRPF39Q86UA1 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.44□□□□□ -1.54
PRPF39Q86UA1 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AL049844.2-201ENST00000604280 628 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AL139407.1-201ENST00000613826 1175 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AC109583.2-201ENST00000617367 129 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AC118658.2-201ENST00000618697 459 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.44□□□□□ -1.54
PRPF39Q86UA1 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AC091932.2-201ENST00000623014 291 ntBASIC5.44□□□□□ -1.54
PRPF39Q86UA1 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PRPF39Q86UA1 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
PRPF39Q86UA1 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.44□□□□□ -1.54
PRPF39Q86UA1 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.44□□□□□ -1.54
PRPF39Q86UA1 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PRPF39Q86UA1 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.44□□□□□ -1.54
PRPF39Q86UA1 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 RPL23P2-201ENST00000320371 421 ntBASIC5.43□□□□□ -1.54
PRPF39Q86UA1 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 MIR320B1-201ENST00000390209 79 ntBASIC5.43□□□□□ -1.54
PRPF39Q86UA1 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 RNA5SP498-201ENST00000411342 120 ntBASIC5.43□□□□□ -1.54
PRPF39Q86UA1 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 AC005033.1-201ENST00000428904 813 ntBASIC5.43□□□□□ -1.54
PRPF39Q86UA1 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 GAPDHP25-201ENST00000447061 1001 ntBASIC5.43□□□□□ -1.54
PRPF39Q86UA1 PRPF38AP1-201ENST00000451976 933 ntBASIC5.43□□□□□ -1.54
PRPF39Q86UA1 AC002553.2-201ENST00000453217 340 ntBASIC5.43□□□□□ -1.54
PRPF39Q86UA1 SBDSP1-204ENST00000453858 737 ntBASIC5.43□□□□□ -1.54
PRPF39Q86UA1 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 RNU7-27P-201ENST00000459281 62 ntBASIC5.43□□□□□ -1.54
PRPF39Q86UA1 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 RPS12P31-201ENST00000491419 398 ntBASIC5.43□□□□□ -1.54
PRPF39Q86UA1 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 EIF3KP3-201ENST00000514461 639 ntBASIC5.43□□□□□ -1.54
PRPF39Q86UA1 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 RNA5SP373-201ENST00000517271 95 ntBASIC5.43□□□□□ -1.54
PRPF39Q86UA1 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 AC005341.1-201ENST00000571086 708 ntBASIC5.43□□□□□ -1.54
PRPF39Q86UA1 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 AC127024.5-201ENST00000580085 462 ntBASIC5.43□□□□□ -1.54
PRPF39Q86UA1 SS18L2P2-201ENST00000583960 235 ntBASIC5.43□□□□□ -1.54
PRPF39Q86UA1 PRPF19P1-201ENST00000584766 898 ntBASIC5.43□□□□□ -1.54
PRPF39Q86UA1 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.43□□□□□ -1.54
PRPF39Q86UA1 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms