Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MT-TL1-201ENST00000386347 75 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 MT-TD-201ENST00000387419 68 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 HMGB1P10-201ENST00000395823 563 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 RPL21P108-201ENST00000413857 481 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 XKRYP4-201ENST00000414395 483 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 AL929472.1-201ENST00000417484 429 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 NPM1P22-201ENST00000427761 952 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 AC016908.1-201ENST00000442571 1219 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 Z99127.3-201ENST00000448158 395 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 XKRYP5-201ENST00000449659 483 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 CDC42P1-201ENST00000456658 548 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 OR9M1P-201ENST00000459641 921 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 AL672167.3-201ENST00000465951 960 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 RPL9P6-201ENST00000492764 598 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 SUMO1P1-201ENST00000497904 306 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 AC147055.4-201ENST00000504399 745 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 SMARCE1P4-201ENST00000523647 241 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 AC124947.2-202ENST00000552735 133 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 AC091489.2-201ENST00000566263 604 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 AC022432.1-201ENST00000595739 310 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 AL953862.2-201ENST00000603089 820 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 AC004805.3-201ENST00000603178 310 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 AC093388.1-201ENST00000609166 430 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 uc_338.31-201ENST00000615595 186 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 USP12-203ENST00000620323 349 ntTSL 3 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 AC012414.7-202ENST00000622705 1090 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 AC073488.9-201ENST00000631601 754 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
RNF43Q68DV7 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RNF43Q68DV7 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RNF43Q68DV7 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RNF43Q68DV7 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
RNF43Q68DV7 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF43Q68DV7 LINC01613-201ENST00000561476 2780 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RNF43Q68DV7 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF43Q68DV7 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF43Q68DV7 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF43Q68DV7 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RNF43Q68DV7 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 snoZ40.1-201ENST00000364540 72 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 AL035419.1-201ENST00000397037 564 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 CIR1P3-201ENST00000405137 479 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 RPS20P15-201ENST00000412792 311 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 SEPT7P8-201ENST00000413308 775 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 AL513174.1-201ENST00000423182 629 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 RPL21P43-201ENST00000425440 472 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 AC083862.1-201ENST00000427378 1242 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RNF43Q68DV7 RPL21P134-201ENST00000453468 483 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 AL139156.3-201ENST00000454802 394 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 DNAJC19P1-201ENST00000455312 319 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 SULT1D1P-201ENST00000458020 882 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 AC146507.1-201ENST00000468335 354 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 RPL7P18-201ENST00000478965 734 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 HMGN1P16-201ENST00000508308 283 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 SCARNA21.2-201ENST00000516600 166 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 TBCA-203ENST00000517679 545 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms