Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC58Q4VC31 RPL35AP19-201ENST00000469425 329 ntBASIC4.39□□□□□ -1.71
CCDC58Q4VC31 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC58Q4VC31 AC007998.1-201ENST00000474156 672 ntBASIC4.39□□□□□ -1.71
CCDC58Q4VC31 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC58Q4VC31 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC58Q4VC31 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC58Q4VC31 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC58Q4VC31 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC58Q4VC31 AC126177.5-201ENST00000549599 178 ntBASIC4.39□□□□□ -1.71
CCDC58Q4VC31 RPL21P7-201ENST00000557463 483 ntBASIC4.39□□□□□ -1.71
CCDC58Q4VC31 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC58Q4VC31 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC58Q4VC31 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC58Q4VC31 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC58Q4VC31 AL049794.2-201ENST00000616301 365 ntBASIC4.39□□□□□ -1.71
CCDC58Q4VC31 AC090527.3-201ENST00000619041 548 ntBASIC4.39□□□□□ -1.71
CCDC58Q4VC31 CYP4F35P-202ENST00000636121 390 ntBASIC4.39□□□□□ -1.71
CCDC58Q4VC31 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
CCDC58Q4VC31 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CCDC58Q4VC31 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC58Q4VC31 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC58Q4VC31 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AL645733.1-201ENST00000402250 217 ntBASIC4.38□□□□□ -1.71
CCDC58Q4VC31 U3.35-201ENST00000408405 208 ntBASIC4.38□□□□□ -1.71
CCDC58Q4VC31 RN7SKP240-201ENST00000410583 375 ntBASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AC012075.1-201ENST00000436549 580 ntBASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 Z80107.2-201ENST00000445127 392 ntBASIC4.38□□□□□ -1.71
CCDC58Q4VC31 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 RPL23AP2-201ENST00000471227 466 ntBASIC4.38□□□□□ -1.71
CCDC58Q4VC31 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 OR2A3P-201ENST00000493774 953 ntBASIC4.38□□□□□ -1.71
CCDC58Q4VC31 PSMA2P2-201ENST00000504319 686 ntBASIC4.38□□□□□ -1.71
CCDC58Q4VC31 SNORD46.2-201ENST00000516021 102 ntBASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 VTA1P2-201ENST00000520205 911 ntBASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AC012339.2-201ENST00000523996 453 ntBASIC4.38□□□□□ -1.71
CCDC58Q4VC31 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AC027243.2-201ENST00000602530 724 ntBASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AL139395.1-201ENST00000603662 160 ntBASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 SUGT1P3-202ENST00000604259 383 ntBASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AC009779.8-202ENST00000607990 932 ntBASIC4.38□□□□□ -1.71
CCDC58Q4VC31 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.38□□□□□ -1.71
CCDC58Q4VC31 MIR6889-201ENST00000613185 59 ntBASIC4.38□□□□□ -1.71
CCDC58Q4VC31 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.38□□□□□ -1.71
CCDC58Q4VC31 AC005086.4-201ENST00000623065 213 ntBASIC4.38□□□□□ -1.71
CCDC58Q4VC31 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCDC58Q4VC31 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 IQCB2P-201ENST00000401788 1633 ntBASIC4.37□□□□□ -1.71
CCDC58Q4VC31 RNU1-108P-201ENST00000362556 161 ntBASIC4.37□□□□□ -1.71
CCDC58Q4VC31 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 RNU1-77P-201ENST00000390868 162 ntBASIC4.37□□□□□ -1.71
CCDC58Q4VC31 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 AC004448.2-201ENST00000422360 586 ntBASIC4.37□□□□□ -1.71
CCDC58Q4VC31 RPS27P18-201ENST00000431701 247 ntBASIC4.37□□□□□ -1.71
CCDC58Q4VC31 CYCSP6-201ENST00000434498 302 ntBASIC4.37□□□□□ -1.71
CCDC58Q4VC31 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 KNOP1P3-201ENST00000446933 426 ntBASIC4.37□□□□□ -1.71
CCDC58Q4VC31 AC104306.1-201ENST00000449702 371 ntBASIC4.37□□□□□ -1.71
CCDC58Q4VC31 AC019084.1-201ENST00000457337 432 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms