Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
FOXF1Q12946 SMG1P6-201ENST00000532337 2930 ntBASIC4.35□□□□□ -1.71
FOXF1Q12946 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXF1Q12946 U3.35-201ENST00000408405 208 ntBASIC4.35□□□□□ -1.71
FOXF1Q12946 MIR1271-201ENST00000408537 86 ntBASIC4.35□□□□□ -1.71
FOXF1Q12946 TMBIM7P-201ENST00000418074 855 ntBASIC4.35□□□□□ -1.71
FOXF1Q12946 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXF1Q12946 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXF1Q12946 AL451139.1-201ENST00000434718 346 ntBASIC4.35□□□□□ -1.71
FOXF1Q12946 AL161722.1-201ENST00000446972 1032 ntBASIC4.35□□□□□ -1.71
FOXF1Q12946 AC091685.2-201ENST00000454924 864 ntBASIC4.35□□□□□ -1.71
FOXF1Q12946 RPL35AP28-201ENST00000459730 331 ntBASIC4.35□□□□□ -1.71
FOXF1Q12946 RN7SL346P-201ENST00000491561 294 ntBASIC4.35□□□□□ -1.71
FOXF1Q12946 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXF1Q12946 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.35□□□□□ -1.71
FOXF1Q12946 BUD31P1-201ENST00000521828 359 ntBASIC4.35□□□□□ -1.71
FOXF1Q12946 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.35□□□□□ -1.71
FOXF1Q12946 AP001880.2-201ENST00000538233 448 ntBASIC4.35□□□□□ -1.71
FOXF1Q12946 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.35□□□□□ -1.71
FOXF1Q12946 PCNPP1-201ENST00000552501 511 ntBASIC4.35□□□□□ -1.71
FOXF1Q12946 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.35□□□□□ -1.71
FOXF1Q12946 SETP1-201ENST00000556014 845 ntBASIC4.35□□□□□ -1.71
FOXF1Q12946 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXF1Q12946 AC007448.1-201ENST00000582714 234 ntBASIC4.35□□□□□ -1.71
FOXF1Q12946 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
FOXF1Q12946 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.35□□□□□ -1.71
FOXF1Q12946 AC024940.4-201ENST00000605507 246 ntBASIC4.35□□□□□ -1.71
FOXF1Q12946 FAM25E-202ENST00000608562 189 ntBASIC4.35□□□□□ -1.71
FOXF1Q12946 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXF1Q12946 AC083843.3-201ENST00000623679 2186 ntBASIC4.35□□□□□ -1.71
FOXF1Q12946 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXF1Q12946 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
FOXF1Q12946 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXF1Q12946 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXF1Q12946 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
FOXF1Q12946 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXF1Q12946 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXF1Q12946 SOCS5P3-201ENST00000425115 1576 ntBASIC4.35□□□□□ -1.71
FOXF1Q12946 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
FOXF1Q12946 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.35□□□□□ -1.71
FOXF1Q12946 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
FOXF1Q12946 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
FOXF1Q12946 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXF1Q12946 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXF1Q12946 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXF1Q12946 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXF1Q12946 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXF1Q12946 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXF1Q12946 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXF1Q12946 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXF1Q12946 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
FOXF1Q12946 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
FOXF1Q12946 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXF1Q12946 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXF1Q12946 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
FOXF1Q12946 RNU1-82P-201ENST00000390851 165 ntBASIC4.34□□□□□ -1.71
FOXF1Q12946 RNA5SP113-201ENST00000410486 84 ntBASIC4.34□□□□□ -1.71
FOXF1Q12946 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXF1Q12946 E2F6P2-201ENST00000420708 748 ntBASIC4.34□□□□□ -1.71
FOXF1Q12946 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.34□□□□□ -1.71
FOXF1Q12946 AL136455.1-201ENST00000441083 1240 ntBASIC4.34□□□□□ -1.71
FOXF1Q12946 RHEBP2-201ENST00000450289 600 ntBASIC4.34□□□□□ -1.71
FOXF1Q12946 AL645937.3-201ENST00000453647 936 ntBASIC4.34□□□□□ -1.71
FOXF1Q12946 AC104971.1-201ENST00000495117 578 ntBASIC4.34□□□□□ -1.71
FOXF1Q12946 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXF1Q12946 HMGB3P16-201ENST00000508037 287 ntBASIC4.34□□□□□ -1.71
FOXF1Q12946 AC091868.1-201ENST00000508746 304 ntBASIC4.34□□□□□ -1.71
FOXF1Q12946 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.34□□□□□ -1.71
FOXF1Q12946 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXF1Q12946 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXF1Q12946 BNIP3P1-201ENST00000547295 580 ntBASIC4.34□□□□□ -1.71
FOXF1Q12946 AL390334.1-201ENST00000556395 450 ntBASIC4.34□□□□□ -1.71
FOXF1Q12946 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXF1Q12946 MIR5699-201ENST00000578903 90 ntBASIC4.34□□□□□ -1.71
FOXF1Q12946 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.34□□□□□ -1.71
FOXF1Q12946 OR8G7P-201ENST00000616658 848 ntBASIC4.34□□□□□ -1.71
FOXF1Q12946 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXF1Q12946 AF117829.2-201ENST00000619538 361 ntBASIC4.34□□□□□ -1.71
FOXF1Q12946 AC022106.2-201ENST00000620114 757 ntBASIC4.34□□□□□ -1.71
FOXF1Q12946 AC006453.5-201ENST00000636451 619 ntBASIC4.34□□□□□ -1.71
FOXF1Q12946 MAPK10-263ENST00000641052 4307 ntBASIC4.34□□□□□ -1.71
FOXF1Q12946 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.34□□□□□ -1.71
FOXF1Q12946 AL034370.1-201ENST00000397254 1590 ntBASIC4.34□□□□□ -1.71
FOXF1Q12946 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXF1Q12946 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.34□□□□□ -1.72
FOXF1Q12946 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
FOXF1Q12946 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
FOXF1Q12946 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.34□□□□□ -1.72
FOXF1Q12946 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
FOXF1Q12946 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
FOXF1Q12946 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXF1Q12946 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXF1Q12946 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
FOXF1Q12946 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXF1Q12946 AC093591.2-201ENST00000565254 3843 ntBASIC4.33□□□□□ -1.72
FOXF1Q12946 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.33□□□□□ -1.72
FOXF1Q12946 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXF1Q12946 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
FOXF1Q12946 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXF1Q12946 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms