Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RN7SL97P-201ENST00000486780 299 ntBASIC4.67□□□□□ -1.66
HMGCS1Q01581 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HMGCS1Q01581 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 AC147055.3-201ENST00000510547 851 ntBASIC4.67□□□□□ -1.66
HMGCS1Q01581 Y_RNA.719-201ENST00000517156 106 ntBASIC4.67□□□□□ -1.66
HMGCS1Q01581 RNU6-709P-201ENST00000517257 104 ntBASIC4.67□□□□□ -1.66
HMGCS1Q01581 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 SNORA74C-1-201ENST00000580726 201 ntBASIC4.67□□□□□ -1.66
HMGCS1Q01581 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 AL356752.1-201ENST00000615844 593 ntBASIC4.67□□□□□ -1.66
HMGCS1Q01581 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.67□□□□□ -1.66
HMGCS1Q01581 AC015804.1-201ENST00000622935 435 ntBASIC4.67□□□□□ -1.66
HMGCS1Q01581 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGCS1Q01581 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGCS1Q01581 HSPA8P18-201ENST00000439846 1928 ntBASIC4.67□□□□□ -1.66
HMGCS1Q01581 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGCS1Q01581 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGCS1Q01581 CR382285.2-201ENST00000624662 1495 ntBASIC4.67□□□□□ -1.66
HMGCS1Q01581 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HMGCS1Q01581 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGCS1Q01581 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
HMGCS1Q01581 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMGCS1Q01581 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HMGCS1Q01581 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.66□□□□□ -1.66
HMGCS1Q01581 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMGCS1Q01581 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.66□□□□□ -1.66
HMGCS1Q01581 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.66□□□□□ -1.66
HMGCS1Q01581 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HMGCS1Q01581 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
HMGCS1Q01581 UBBP2-201ENST00000376781 231 ntBASIC4.66□□□□□ -1.66
HMGCS1Q01581 SNORA70-201ENST00000384436 135 ntBASIC4.66□□□□□ -1.66
HMGCS1Q01581 U3.35-201ENST00000408405 208 ntBASIC4.66□□□□□ -1.66
HMGCS1Q01581 MIR1271-201ENST00000408537 86 ntBASIC4.66□□□□□ -1.66
HMGCS1Q01581 RNA5SP345-201ENST00000410646 108 ntBASIC4.66□□□□□ -1.66
HMGCS1Q01581 CEACAMP7-201ENST00000444105 496 ntBASIC4.66□□□□□ -1.66
HMGCS1Q01581 AL031584.1-201ENST00000447169 754 ntBASIC4.66□□□□□ -1.66
HMGCS1Q01581 AC073850.1-201ENST00000449243 255 ntBASIC4.66□□□□□ -1.66
HMGCS1Q01581 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.66□□□□□ -1.66
HMGCS1Q01581 RNA5SP103-201ENST00000459503 118 ntBASIC4.66□□□□□ -1.66
HMGCS1Q01581 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGCS1Q01581 AC138938.1-201ENST00000515431 782 ntBASIC4.66□□□□□ -1.66
HMGCS1Q01581 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGCS1Q01581 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.66□□□□□ -1.66
HMGCS1Q01581 AC013701.1-201ENST00000522657 465 ntBASIC4.66□□□□□ -1.66
HMGCS1Q01581 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.66□□□□□ -1.66
HMGCS1Q01581 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGCS1Q01581 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.66□□□□□ -1.66
HMGCS1Q01581 AL390334.1-201ENST00000556395 450 ntBASIC4.66□□□□□ -1.66
HMGCS1Q01581 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGCS1Q01581 AC044860.2-201ENST00000561005 179 ntBASIC4.66□□□□□ -1.66
HMGCS1Q01581 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.66□□□□□ -1.66
HMGCS1Q01581 AC087763.1-201ENST00000603391 286 ntBASIC4.66□□□□□ -1.66
HMGCS1Q01581 AL445222.1-201ENST00000607259 628 ntBASIC4.66□□□□□ -1.66
HMGCS1Q01581 AC211433.2-201ENST00000608433 387 ntBASIC4.66□□□□□ -1.66
HMGCS1Q01581 AC073575.2-201ENST00000614212 627 ntBASIC4.66□□□□□ -1.66
HMGCS1Q01581 AP002799.1-201ENST00000623552 423 ntBASIC4.66□□□□□ -1.66
HMGCS1Q01581 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.66□□□□□ -1.66
HMGCS1Q01581 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.66□□□□□ -1.66
HMGCS1Q01581 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HMGCS1Q01581 MTND5P23-201ENST00000430812 1655 ntBASIC4.66□□□□□ -1.66
HMGCS1Q01581 AC245100.2-201ENST00000454544 1679 ntBASIC4.66□□□□□ -1.66
HMGCS1Q01581 CR383656.5-201ENST00000547616 1340 ntBASIC4.66□□□□□ -1.66
HMGCS1Q01581 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HMGCS1Q01581 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HMGCS1Q01581 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HMGCS1Q01581 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
HMGCS1Q01581 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
HMGCS1Q01581 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HMGCS1Q01581 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
HMGCS1Q01581 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HMGCS1Q01581 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
HMGCS1Q01581 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
HMGCS1Q01581 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HMGCS1Q01581 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.67
HMGCS1Q01581 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HMGCS1Q01581 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HMGCS1Q01581 Z97832.1-201ENST00000402490 328 ntBASIC4.65□□□□□ -1.67
HMGCS1Q01581 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.65□□□□□ -1.67
HMGCS1Q01581 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.65□□□□□ -1.67
HMGCS1Q01581 SNORA79B-201ENST00000410557 148 ntBASIC4.65□□□□□ -1.67
HMGCS1Q01581 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.65□□□□□ -1.67
HMGCS1Q01581 AC093162.1-201ENST00000419682 124 ntBASIC4.65□□□□□ -1.67
HMGCS1Q01581 AC004938.1-201ENST00000438468 308 ntBASIC4.65□□□□□ -1.67
HMGCS1Q01581 AC092647.3-201ENST00000443044 633 ntBASIC4.65□□□□□ -1.67
HMGCS1Q01581 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HMGCS1Q01581 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.65□□□□□ -1.67
HMGCS1Q01581 RPL7AP6-201ENST00000477943 801 ntBASIC4.65□□□□□ -1.67
HMGCS1Q01581 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.65□□□□□ -1.67
HMGCS1Q01581 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.65□□□□□ -1.67
HMGCS1Q01581 RN7SL808P-201ENST00000496066 299 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms