Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC245100.2-201ENST00000454544 1679 ntBASIC5.37□□□□□ -1.55
TPM4P67936 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TPM4P67936 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.37□□□□□ -1.55
TPM4P67936 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TPM4P67936 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.37□□□□□ -1.55
TPM4P67936 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TPM4P67936 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
TPM4P67936 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TPM4P67936 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
TPM4P67936 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
TPM4P67936 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TPM4P67936 AL357515.1-201ENST00000402967 542 ntBASIC5.36□□□□□ -1.55
TPM4P67936 AL139039.2-201ENST00000407436 479 ntBASIC5.36□□□□□ -1.55
TPM4P67936 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.36□□□□□ -1.55
TPM4P67936 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.36□□□□□ -1.55
TPM4P67936 AC000111.2-201ENST00000448200 210 ntBASIC5.36□□□□□ -1.55
TPM4P67936 AC097484.1-201ENST00000471148 389 ntBASIC5.36□□□□□ -1.55
TPM4P67936 OR9N1P-201ENST00000491296 333 ntBASIC5.36□□□□□ -1.55
TPM4P67936 AC108022.1-201ENST00000493466 478 ntBASIC5.36□□□□□ -1.55
TPM4P67936 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TPM4P67936 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.36□□□□□ -1.55
TPM4P67936 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.36□□□□□ -1.55
TPM4P67936 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.36□□□□□ -1.55
TPM4P67936 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.36□□□□□ -1.55
TPM4P67936 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TPM4P67936 RBM7-208ENST00000545678 867 ntTSL 3 BASIC5.36□□□□□ -1.55
TPM4P67936 AC125612.1-201ENST00000547580 377 ntBASIC5.36□□□□□ -1.55
TPM4P67936 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.36□□□□□ -1.55
TPM4P67936 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.36□□□□□ -1.55
TPM4P67936 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.36□□□□□ -1.55
TPM4P67936 AC130352.1-201ENST00000602979 661 ntBASIC5.36□□□□□ -1.55
TPM4P67936 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.36□□□□□ -1.55
TPM4P67936 AC006840.1-201ENST00000623069 542 ntBASIC5.36□□□□□ -1.55
TPM4P67936 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.36□□□□□ -1.55
TPM4P67936 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TPM4P67936 NXF4-202ENST00000416098 1465 ntBASIC5.36□□□□□ -1.55
TPM4P67936 EOGT-210ENST00000615922 1931 ntBASIC5.36□□□□□ -1.55
TPM4P67936 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TPM4P67936 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.36□□□□□ -1.55
TPM4P67936 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TPM4P67936 AC027279.1-201ENST00000568885 4284 ntBASIC5.35□□□□□ -1.55
TPM4P67936 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TPM4P67936 MTCO1P22-201ENST00000604619 1360 ntBASIC5.35□□□□□ -1.55
TPM4P67936 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.35□□□□□ -1.55
TPM4P67936 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.35□□□□□ -1.55
TPM4P67936 MIR921-201ENST00000401133 56 ntBASIC5.35□□□□□ -1.55
TPM4P67936 AC233289.1-201ENST00000403700 508 ntBASIC5.35□□□□□ -1.55
TPM4P67936 HDGFP1-201ENST00000405943 252 ntBASIC5.35□□□□□ -1.55
TPM4P67936 AL356968.2-201ENST00000412769 1257 ntBASIC5.35□□□□□ -1.55
TPM4P67936 TBCAP2-201ENST00000416175 326 ntBASIC5.35□□□□□ -1.55
TPM4P67936 OR2AM1P-201ENST00000422137 422 ntBASIC5.35□□□□□ -1.55
TPM4P67936 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.35□□□□□ -1.55
TPM4P67936 AP000281.1-201ENST00000444036 316 ntBASIC5.35□□□□□ -1.55
TPM4P67936 AC002553.2-201ENST00000453217 340 ntBASIC5.35□□□□□ -1.55
TPM4P67936 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.35□□□□□ -1.55
TPM4P67936 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.35□□□□□ -1.55
TPM4P67936 RN7SL222P-201ENST00000476452 299 ntBASIC5.35□□□□□ -1.55
TPM4P67936 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.35□□□□□ -1.55
TPM4P67936 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.35□□□□□ -1.55
TPM4P67936 AC113430.1-201ENST00000506872 718 ntBASIC5.35□□□□□ -1.55
TPM4P67936 RN7SKP70-201ENST00000516655 271 ntBASIC5.35□□□□□ -1.55
TPM4P67936 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.35□□□□□ -1.55
TPM4P67936 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.35□□□□□ -1.55
TPM4P67936 AC005363.1-201ENST00000530779 351 ntBASIC5.35□□□□□ -1.55
TPM4P67936 MIR5010-201ENST00000582846 120 ntBASIC5.35□□□□□ -1.55
TPM4P67936 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.35□□□□□ -1.55
TPM4P67936 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.35□□□□□ -1.55
TPM4P67936 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.35□□□□□ -1.55
TPM4P67936 AC005520.3-201ENST00000602874 370 ntBASIC5.35□□□□□ -1.55
TPM4P67936 AL589674.2-201ENST00000604304 337 ntBASIC5.35□□□□□ -1.55
TPM4P67936 AC026979.4-201ENST00000606555 645 ntBASIC5.35□□□□□ -1.55
TPM4P67936 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TPM4P67936 SNX18P1Y-201ENST00000616231 511 ntBASIC5.35□□□□□ -1.55
TPM4P67936 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.35□□□□□ -1.55
TPM4P67936 AC005086.4-201ENST00000623065 213 ntBASIC5.35□□□□□ -1.55
TPM4P67936 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.35□□□□□ -1.55
TPM4P67936 AC055839.1-201ENST00000634467 498 ntBASIC5.35□□□□□ -1.55
TPM4P67936 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TPM4P67936 AL672167.1-203ENST00000641299 2975 ntBASIC5.35□□□□□ -1.55
TPM4P67936 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TPM4P67936 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.35□□□□□ -1.55
TPM4P67936 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TPM4P67936 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TPM4P67936 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.34□□□□□ -1.55
TPM4P67936 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
TPM4P67936 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
TPM4P67936 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TPM4P67936 MTND5P23-201ENST00000430812 1655 ntBASIC5.34□□□□□ -1.55
TPM4P67936 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TPM4P67936 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TPM4P67936 AP001002.1-201ENST00000625148 1513 ntBASIC5.34□□□□□ -1.55
TPM4P67936 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.34□□□□□ -1.55
TPM4P67936 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
TPM4P67936 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.34□□□□□ -1.55
TPM4P67936 RNU1-20P-201ENST00000363314 162 ntBASIC5.34□□□□□ -1.55
TPM4P67936 DUTP5-201ENST00000406790 469 ntBASIC5.34□□□□□ -1.55
TPM4P67936 RNA5SP178-201ENST00000410380 128 ntBASIC5.34□□□□□ -1.55
TPM4P67936 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.34□□□□□ -1.55
TPM4P67936 PTP4A1P1-201ENST00000420539 515 ntBASIC5.34□□□□□ -1.55
TPM4P67936 EIF4EP1-201ENST00000422311 642 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms