Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.83□□□□□ -1.64
CDH11P55287 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH11P55287 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH11P55287 AC092754.1-201ENST00000472975 479 ntBASIC4.83□□□□□ -1.64
CDH11P55287 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH11P55287 AC016550.1-201ENST00000505348 785 ntBASIC4.83□□□□□ -1.64
CDH11P55287 MTND6P2-201ENST00000512226 524 ntBASIC4.83□□□□□ -1.64
CDH11P55287 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH11P55287 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.83□□□□□ -1.64
CDH11P55287 RNU6-513P-201ENST00000516104 104 ntBASIC4.83□□□□□ -1.64
CDH11P55287 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH11P55287 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH11P55287 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH11P55287 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH11P55287 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH11P55287 AC004825.1-201ENST00000555068 586 ntBASIC4.83□□□□□ -1.64
CDH11P55287 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH11P55287 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.83□□□□□ -1.64
CDH11P55287 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH11P55287 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH11P55287 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH11P55287 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH11P55287 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH11P55287 RN7SL356P-201ENST00000582228 248 ntBASIC4.83□□□□□ -1.64
CDH11P55287 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH11P55287 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH11P55287 FKBP1AP1-201ENST00000594588 318 ntBASIC4.83□□□□□ -1.64
CDH11P55287 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH11P55287 BNIP3P27-201ENST00000599991 412 ntBASIC4.83□□□□□ -1.64
CDH11P55287 BMS1P7-201ENST00000602440 1052 ntBASIC4.83□□□□□ -1.64
CDH11P55287 AL139022.2-201ENST00000606934 443 ntBASIC4.83□□□□□ -1.64
CDH11P55287 AL139407.1-201ENST00000613826 1175 ntBASIC4.83□□□□□ -1.64
CDH11P55287 AL122125.1-201ENST00000616999 600 ntBASIC4.83□□□□□ -1.64
CDH11P55287 MIR6837-201ENST00000620884 64 ntBASIC4.83□□□□□ -1.64
CDH11P55287 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH11P55287 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CDH11P55287 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH11P55287 AP003400.3-201ENST00000624904 346 ntBASIC4.83□□□□□ -1.64
CDH11P55287 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH11P55287 SAMMSON-209ENST00000641222 1100 ntBASIC4.83□□□□□ -1.64
CDH11P55287 CASC19-264ENST00000641912 1184 ntBASIC4.83□□□□□ -1.64
CDH11P55287 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH11P55287 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CDH11P55287 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH11P55287 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH11P55287 SOCS5P3-201ENST00000425115 1576 ntBASIC4.82□□□□□ -1.64
CDH11P55287 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH11P55287 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.82□□□□□ -1.64
CDH11P55287 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH11P55287 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH11P55287 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CDH11P55287 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CDH11P55287 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH11P55287 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH11P55287 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH11P55287 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH11P55287 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH11P55287 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH11P55287 RPL10P10-201ENST00000403509 664 ntBASIC4.82□□□□□ -1.64
CDH11P55287 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.82□□□□□ -1.64
CDH11P55287 AC211486.3-201ENST00000412694 621 ntBASIC4.82□□□□□ -1.64
CDH11P55287 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH11P55287 MTND2P15-201ENST00000418575 892 ntBASIC4.82□□□□□ -1.64
CDH11P55287 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH11P55287 HSFY1P1-201ENST00000423928 1178 ntBASIC4.82□□□□□ -1.64
CDH11P55287 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH11P55287 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH11P55287 AC019185.1-201ENST00000442718 389 ntBASIC4.82□□□□□ -1.64
CDH11P55287 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH11P55287 AC006326.1-201ENST00000445465 787 ntBASIC4.82□□□□□ -1.64
CDH11P55287 AC012512.1-201ENST00000446594 718 ntBASIC4.82□□□□□ -1.64
CDH11P55287 COPS8P2-201ENST00000473228 627 ntBASIC4.82□□□□□ -1.64
CDH11P55287 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH11P55287 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH11P55287 AC069304.1-201ENST00000491593 704 ntBASIC4.82□□□□□ -1.64
CDH11P55287 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH11P55287 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH11P55287 NIFKP7-201ENST00000503365 834 ntBASIC4.82□□□□□ -1.64
CDH11P55287 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH11P55287 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH11P55287 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH11P55287 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.82□□□□□ -1.64
CDH11P55287 AC093014.1-201ENST00000548926 724 ntBASIC4.82□□□□□ -1.64
CDH11P55287 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH11P55287 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH11P55287 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH11P55287 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH11P55287 AL096803.3-201ENST00000609032 532 ntBASIC4.82□□□□□ -1.64
CDH11P55287 AL118522.2-201ENST00000616045 615 ntBASIC4.82□□□□□ -1.64
CDH11P55287 MIR1264-201ENST00000616374 69 ntBASIC4.82□□□□□ -1.64
CDH11P55287 BNIP3P41-202ENST00000616656 861 ntBASIC4.82□□□□□ -1.64
CDH11P55287 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH11P55287 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CDH11P55287 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CDH11P55287 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
CDH11P55287 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH11P55287 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH11P55287 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH11P55287 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH11P55287 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms