Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC128716.1-201ENST00000475129 166 ntBASIC5.56□□□□□ -1.52
HMGCS2P54868 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGCS2P54868 RN7SL558P-201ENST00000497468 299 ntBASIC5.56□□□□□ -1.52
HMGCS2P54868 AC016559.2-201ENST00000510759 359 ntBASIC5.56□□□□□ -1.52
HMGCS2P54868 RNU1-6P-201ENST00000516290 144 ntBASIC5.56□□□□□ -1.52
HMGCS2P54868 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
HMGCS2P54868 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.56□□□□□ -1.52
HMGCS2P54868 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGCS2P54868 SNORA74C-1-201ENST00000580726 201 ntBASIC5.56□□□□□ -1.52
HMGCS2P54868 AC020910.2-201ENST00000603635 610 ntBASIC5.56□□□□□ -1.52
HMGCS2P54868 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGCS2P54868 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCS2P54868 TTC41P-205ENST00000551270 3963 ntBASIC5.56□□□□□ -1.52
HMGCS2P54868 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCS2P54868 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCS2P54868 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
HMGCS2P54868 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGCS2P54868 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS2P54868 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGCS2P54868 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HMGCS2P54868 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGCS2P54868 AC120338.1-201ENST00000625074 1541 ntBASIC5.55□□□□□ -1.52
HMGCS2P54868 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS2P54868 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS2P54868 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HMGCS2P54868 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGCS2P54868 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS2P54868 RNA5SP479-201ENST00000364858 117 ntBASIC5.55□□□□□ -1.52
HMGCS2P54868 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS2P54868 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HMGCS2P54868 UQCRBP1-201ENST00000421129 336 ntBASIC5.55□□□□□ -1.52
HMGCS2P54868 AC013410.1-201ENST00000436223 1232 ntBASIC5.55□□□□□ -1.52
HMGCS2P54868 AL606490.8-201ENST00000441624 319 ntBASIC5.55□□□□□ -1.52
HMGCS2P54868 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGCS2P54868 RPSAP51-201ENST00000497462 645 ntBASIC5.55□□□□□ -1.52
HMGCS2P54868 NIFKP7-201ENST00000503365 834 ntBASIC5.55□□□□□ -1.52
HMGCS2P54868 ENPP7P11-201ENST00000505915 627 ntBASIC5.55□□□□□ -1.52
HMGCS2P54868 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGCS2P54868 EIF4EP5-201ENST00000528228 640 ntBASIC5.55□□□□□ -1.52
HMGCS2P54868 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
HMGCS2P54868 AC116553.2-201ENST00000564203 463 ntBASIC5.55□□□□□ -1.52
HMGCS2P54868 RN7SL652P-201ENST00000577769 300 ntBASIC5.55□□□□□ -1.52
HMGCS2P54868 PRPF19P1-201ENST00000584766 898 ntBASIC5.55□□□□□ -1.52
HMGCS2P54868 AC005962.2-201ENST00000611427 652 ntBASIC5.55□□□□□ -1.52
HMGCS2P54868 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGCS2P54868 AC132825.8-201ENST00000640783 297 ntBASIC5.55□□□□□ -1.52
HMGCS2P54868 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
HMGCS2P54868 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGCS2P54868 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS2P54868 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS2P54868 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS2P54868 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS2P54868 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGCS2P54868 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGCS2P54868 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS2P54868 HCFC2P1-201ENST00000392864 1592 ntBASIC5.55□□□□□ -1.52
HMGCS2P54868 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCS2P54868 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCS2P54868 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
HMGCS2P54868 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
HMGCS2P54868 AC112198.2-201ENST00000426589 6996 ntBASIC5.54□□□□□ -1.52
HMGCS2P54868 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
HMGCS2P54868 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCS2P54868 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCS2P54868 RANP7-201ENST00000418085 644 ntBASIC5.54□□□□□ -1.52
HMGCS2P54868 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGCS2P54868 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGCS2P54868 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGCS2P54868 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.54□□□□□ -1.52
HMGCS2P54868 AC097523.2-201ENST00000435551 652 ntBASIC5.54□□□□□ -1.52
HMGCS2P54868 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGCS2P54868 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCS2P54868 Z95152.1-201ENST00000453556 656 ntBASIC5.54□□□□□ -1.52
HMGCS2P54868 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGCS2P54868 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.54□□□□□ -1.52
HMGCS2P54868 AC025674.1-201ENST00000507074 324 ntBASIC5.54□□□□□ -1.52
HMGCS2P54868 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HMGCS2P54868 AC020937.1-201ENST00000519677 1013 ntBASIC5.54□□□□□ -1.52
HMGCS2P54868 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.54□□□□□ -1.52
HMGCS2P54868 AP001781.1-201ENST00000530977 207 ntBASIC5.54□□□□□ -1.52
HMGCS2P54868 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGCS2P54868 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.54□□□□□ -1.52
HMGCS2P54868 AC068831.4-201ENST00000556118 109 ntBASIC5.54□□□□□ -1.52
HMGCS2P54868 AC105129.1-201ENST00000560250 297 ntBASIC5.54□□□□□ -1.52
HMGCS2P54868 AC093249.4-201ENST00000564755 259 ntBASIC5.54□□□□□ -1.52
HMGCS2P54868 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGCS2P54868 KPNA2P3-201ENST00000584190 848 ntBASIC5.54□□□□□ -1.52
HMGCS2P54868 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCS2P54868 AC100847.1-201ENST00000611316 481 ntBASIC5.54□□□□□ -1.52
HMGCS2P54868 AC026367.3-201ENST00000619032 590 ntBASIC5.54□□□□□ -1.52
HMGCS2P54868 AL353684.1-201ENST00000622677 1120 ntBASIC5.54□□□□□ -1.52
HMGCS2P54868 AC002044.3-201ENST00000623314 541 ntBASIC5.54□□□□□ -1.52
HMGCS2P54868 AL049536.1-201ENST00000625043 744 ntBASIC5.54□□□□□ -1.52
HMGCS2P54868 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGCS2P54868 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCS2P54868 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HMGCS2P54868 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.54□□□□□ -1.52
HMGCS2P54868 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HMGCS2P54868 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HMGCS2P54868 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms