Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATXN3P54252 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATXN3P54252 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATXN3P54252 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATXN3P54252 AC110792.3-201ENST00000595906 1614 ntBASIC5.28□□□□□ -1.56
ATXN3P54252 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
ATXN3P54252 RNU4-23P-201ENST00000362839 140 ntBASIC5.28□□□□□ -1.56
ATXN3P54252 RNU6-1251P-201ENST00000364502 107 ntBASIC5.28□□□□□ -1.56
ATXN3P54252 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATXN3P54252 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.28□□□□□ -1.56
ATXN3P54252 SNORD56.6-201ENST00000384569 71 ntBASIC5.28□□□□□ -1.56
ATXN3P54252 MIR192-201ENST00000384915 110 ntBASIC5.28□□□□□ -1.56
ATXN3P54252 SNORD65-201ENST00000391079 73 ntBASIC5.28□□□□□ -1.56
ATXN3P54252 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.28□□□□□ -1.56
ATXN3P54252 GNG5P5-201ENST00000420444 220 ntBASIC5.28□□□□□ -1.56
ATXN3P54252 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.28□□□□□ -1.56
ATXN3P54252 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.28□□□□□ -1.56
ATXN3P54252 IGBP1P3-201ENST00000447449 1000 ntBASIC5.28□□□□□ -1.56
ATXN3P54252 BUD31P2-201ENST00000449374 300 ntBASIC5.28□□□□□ -1.56
ATXN3P54252 OR52E3P-201ENST00000452083 936 ntBASIC5.28□□□□□ -1.56
ATXN3P54252 NDUFA5P9-201ENST00000472609 340 ntBASIC5.28□□□□□ -1.56
ATXN3P54252 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.28□□□□□ -1.56
ATXN3P54252 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.28□□□□□ -1.56
ATXN3P54252 IGBP1P4-201ENST00000503202 879 ntBASIC5.28□□□□□ -1.56
ATXN3P54252 HAUS1P1-201ENST00000505275 832 ntBASIC5.28□□□□□ -1.56
ATXN3P54252 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.28□□□□□ -1.56
ATXN3P54252 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.28□□□□□ -1.56
ATXN3P54252 OR5AZ1P-201ENST00000527448 943 ntBASIC5.28□□□□□ -1.56
ATXN3P54252 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.28□□□□□ -1.56
ATXN3P54252 AC020915.5-201ENST00000596836 964 ntBASIC5.28□□□□□ -1.56
ATXN3P54252 AC087783.2-201ENST00000605070 562 ntBASIC5.28□□□□□ -1.56
ATXN3P54252 AC093799.2-201ENST00000610062 578 ntBASIC5.28□□□□□ -1.56
ATXN3P54252 MIR378J-201ENST00000611988 109 ntBASIC5.28□□□□□ -1.56
ATXN3P54252 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.28□□□□□ -1.56
ATXN3P54252 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.28□□□□□ -1.56
ATXN3P54252 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.28□□□□□ -1.56
ATXN3P54252 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATXN3P54252 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.28□□□□□ -1.56
ATXN3P54252 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATXN3P54252 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.27□□□□□ -1.57
ATXN3P54252 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
ATXN3P54252 THAP12P4-201ENST00000528321 2266 ntBASIC5.27□□□□□ -1.57
ATXN3P54252 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.27□□□□□ -1.57
ATXN3P54252 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATXN3P54252 AC132825.1-201ENST00000463573 2247 ntBASIC5.27□□□□□ -1.57
ATXN3P54252 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATXN3P54252 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATXN3P54252 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATXN3P54252 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATXN3P54252 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATXN3P54252 COX6B1P1-201ENST00000415962 213 ntBASIC5.27□□□□□ -1.57
ATXN3P54252 MTCYBP7-201ENST00000419540 1134 ntBASIC5.27□□□□□ -1.57
ATXN3P54252 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.27□□□□□ -1.57
ATXN3P54252 AC013470.3-201ENST00000420252 1194 ntBASIC5.27□□□□□ -1.57
ATXN3P54252 AC007161.1-204ENST00000423039 460 ntBASIC5.27□□□□□ -1.57
ATXN3P54252 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATXN3P54252 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.27□□□□□ -1.57
ATXN3P54252 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATXN3P54252 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.27□□□□□ -1.57
ATXN3P54252 RPL12P18-201ENST00000437175 325 ntBASIC5.27□□□□□ -1.57
ATXN3P54252 PRPF38AP2-201ENST00000438179 851 ntBASIC5.27□□□□□ -1.57
ATXN3P54252 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.27□□□□□ -1.57
ATXN3P54252 NPM1P39-201ENST00000449818 867 ntBASIC5.27□□□□□ -1.57
ATXN3P54252 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.27□□□□□ -1.57
ATXN3P54252 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.27□□□□□ -1.57
ATXN3P54252 PSAT1P4-201ENST00000466500 526 ntBASIC5.27□□□□□ -1.57
ATXN3P54252 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.27□□□□□ -1.57
ATXN3P54252 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.27□□□□□ -1.57
ATXN3P54252 HMGN1P9-201ENST00000515212 298 ntBASIC5.27□□□□□ -1.57
ATXN3P54252 RN7SKP260-201ENST00000516907 149 ntBASIC5.27□□□□□ -1.57
ATXN3P54252 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.27□□□□□ -1.57
ATXN3P54252 SMG1P4-204ENST00000523028 4131 ntBASIC5.27□□□□□ -1.57
ATXN3P54252 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.27□□□□□ -1.57
ATXN3P54252 AP004607.2-201ENST00000533949 322 ntBASIC5.27□□□□□ -1.57
ATXN3P54252 AP002373.2-201ENST00000541631 1060 ntBASIC5.27□□□□□ -1.57
ATXN3P54252 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
ATXN3P54252 AC063949.1-201ENST00000552900 865 ntBASIC5.27□□□□□ -1.57
ATXN3P54252 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATXN3P54252 AC084759.1-201ENST00000561168 290 ntBASIC5.27□□□□□ -1.57
ATXN3P54252 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATXN3P54252 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
ATXN3P54252 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.27□□□□□ -1.57
ATXN3P54252 MIR7853-201ENST00000584820 132 ntBASIC5.27□□□□□ -1.57
ATXN3P54252 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.27□□□□□ -1.57
ATXN3P54252 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.27□□□□□ -1.57
ATXN3P54252 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.27□□□□□ -1.57
ATXN3P54252 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATXN3P54252 THAP12P5-201ENST00000405864 2275 ntBASIC5.27□□□□□ -1.57
ATXN3P54252 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATXN3P54252 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATXN3P54252 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATXN3P54252 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
ATXN3P54252 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATXN3P54252 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
ATXN3P54252 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATXN3P54252 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
ATXN3P54252 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATXN3P54252 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.26□□□□□ -1.57
ATXN3P54252 NPM1P26-201ENST00000426339 738 ntBASIC5.26□□□□□ -1.57
ATXN3P54252 RPL23AP4-201ENST00000427757 463 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms