Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIMK2P53671 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LIMK2P53671 RNA5SP443-201ENST00000363083 132 ntBASIC5.06□□□□□ -1.6
LIMK2P53671 RN7SKP103-201ENST00000363848 320 ntBASIC5.06□□□□□ -1.6
LIMK2P53671 RNU6-819P-201ENST00000364116 107 ntBASIC5.06□□□□□ -1.6
LIMK2P53671 RNU6-670P-201ENST00000364312 104 ntBASIC5.06□□□□□ -1.6
LIMK2P53671 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LIMK2P53671 RPL37P18-201ENST00000411602 243 ntBASIC5.06□□□□□ -1.6
LIMK2P53671 NPM1P40-201ENST00000412758 733 ntBASIC5.06□□□□□ -1.6
LIMK2P53671 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.06□□□□□ -1.6
LIMK2P53671 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.06□□□□□ -1.6
LIMK2P53671 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LIMK2P53671 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.06□□□□□ -1.6
LIMK2P53671 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.06□□□□□ -1.6
LIMK2P53671 PA2G4P6-201ENST00000438325 1197 ntBASIC5.06□□□□□ -1.6
LIMK2P53671 RSL24D1P2-201ENST00000445584 366 ntBASIC5.06□□□□□ -1.6
LIMK2P53671 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.06□□□□□ -1.6
LIMK2P53671 SEPT7P3-201ENST00000455017 621 ntBASIC5.06□□□□□ -1.6
LIMK2P53671 RPL31P53-201ENST00000457065 348 ntBASIC5.06□□□□□ -1.6
LIMK2P53671 RPS4XP12-201ENST00000461747 709 ntBASIC5.06□□□□□ -1.6
LIMK2P53671 RN7SL443P-201ENST00000464331 290 ntBASIC5.06□□□□□ -1.6
LIMK2P53671 AC097484.1-201ENST00000471148 389 ntBASIC5.06□□□□□ -1.6
LIMK2P53671 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.06□□□□□ -1.6
LIMK2P53671 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LIMK2P53671 HMGB3P16-201ENST00000508037 287 ntBASIC5.06□□□□□ -1.6
LIMK2P53671 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.06□□□□□ -1.6
LIMK2P53671 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LIMK2P53671 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.06□□□□□ -1.6
LIMK2P53671 AP002373.2-201ENST00000541631 1060 ntBASIC5.06□□□□□ -1.6
LIMK2P53671 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.06□□□□□ -1.6
LIMK2P53671 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.06□□□□□ -1.6
LIMK2P53671 AL159169.2-201ENST00000610061 1269 ntBASIC5.06□□□□□ -1.6
LIMK2P53671 AL118556.2-201ENST00000614375 824 ntBASIC5.06□□□□□ -1.6
LIMK2P53671 AC073342.3-201ENST00000624211 193 ntBASIC5.06□□□□□ -1.6
LIMK2P53671 AL353662.3-201ENST00000625131 237 ntBASIC5.06□□□□□ -1.6
LIMK2P53671 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
LIMK2P53671 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIMK2P53671 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIMK2P53671 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIMK2P53671 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LIMK2P53671 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
LIMK2P53671 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
LIMK2P53671 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.06□□□□□ -1.6
LIMK2P53671 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LIMK2P53671 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.05□□□□□ -1.6
LIMK2P53671 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.05□□□□□ -1.6
LIMK2P53671 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LIMK2P53671 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LIMK2P53671 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
LIMK2P53671 STX3-208ENST00000641815 3236 ntBASIC5.05□□□□□ -1.6
LIMK2P53671 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.05□□□□□ -1.6
LIMK2P53671 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.05□□□□□ -1.6
LIMK2P53671 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LIMK2P53671 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LIMK2P53671 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LIMK2P53671 SNURFL-201ENST00000309296 343 ntBASIC5.05□□□□□ -1.6
LIMK2P53671 MIR365B-201ENST00000362317 111 ntBASIC5.05□□□□□ -1.6
LIMK2P53671 AL672167.2-201ENST00000377164 879 ntBASIC5.05□□□□□ -1.6
LIMK2P53671 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LIMK2P53671 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LIMK2P53671 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.05□□□□□ -1.6
LIMK2P53671 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.05□□□□□ -1.6
LIMK2P53671 ARAFP1-201ENST00000422172 605 ntBASIC5.05□□□□□ -1.6
LIMK2P53671 OR2AH1P-201ENST00000425717 928 ntBASIC5.05□□□□□ -1.6
LIMK2P53671 BX323845.1-201ENST00000432417 179 ntBASIC5.05□□□□□ -1.6
LIMK2P53671 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.05□□□□□ -1.6
LIMK2P53671 AC006466.1-201ENST00000438721 289 ntBASIC5.05□□□□□ -1.6
LIMK2P53671 TXNP5-201ENST00000441043 315 ntBASIC5.05□□□□□ -1.6
LIMK2P53671 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.05□□□□□ -1.6
LIMK2P53671 AC093166.2-201ENST00000455969 1017 ntBASIC5.05□□□□□ -1.6
LIMK2P53671 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.05□□□□□ -1.6
LIMK2P53671 ATG10-AS1-201ENST00000504846 648 ntBASIC5.05□□□□□ -1.6
LIMK2P53671 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LIMK2P53671 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.05□□□□□ -1.6
LIMK2P53671 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.05□□□□□ -1.6
LIMK2P53671 ENPP7P9-201ENST00000514456 627 ntBASIC5.05□□□□□ -1.6
LIMK2P53671 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.05□□□□□ -1.6
LIMK2P53671 RN7SKP34-201ENST00000516142 244 ntBASIC5.05□□□□□ -1.6
LIMK2P53671 SNORA70.17-201ENST00000516449 133 ntBASIC5.05□□□□□ -1.6
LIMK2P53671 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.05□□□□□ -1.6
LIMK2P53671 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.05□□□□□ -1.6
LIMK2P53671 OR5AZ1P-201ENST00000527448 943 ntBASIC5.05□□□□□ -1.6
LIMK2P53671 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.05□□□□□ -1.6
LIMK2P53671 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.05□□□□□ -1.6
LIMK2P53671 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.05□□□□□ -1.6
LIMK2P53671 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.05□□□□□ -1.6
LIMK2P53671 PCNPP1-201ENST00000552501 511 ntBASIC5.05□□□□□ -1.6
LIMK2P53671 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.05□□□□□ -1.6
LIMK2P53671 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.05□□□□□ -1.6
LIMK2P53671 RN7SL435P-201ENST00000584418 282 ntBASIC5.05□□□□□ -1.6
LIMK2P53671 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.05□□□□□ -1.6
LIMK2P53671 AC006272.2-201ENST00000594725 163 ntBASIC5.05□□□□□ -1.6
LIMK2P53671 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.05□□□□□ -1.6
LIMK2P53671 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.05□□□□□ -1.6
LIMK2P53671 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.05□□□□□ -1.6
LIMK2P53671 AC016911.1-201ENST00000613297 452 ntBASIC5.05□□□□□ -1.6
LIMK2P53671 EIF3FP1-201ENST00000613970 806 ntBASIC5.05□□□□□ -1.6
LIMK2P53671 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.05□□□□□ -1.6
LIMK2P53671 AC006213.4-201ENST00000616184 634 ntBASIC5.05□□□□□ -1.6
LIMK2P53671 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms