Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USP11P51784 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC7□□□□□ -1.29
USP11P51784 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
USP11P51784 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USP11P51784 SNORA70H-201ENST00000383910 135 ntBASIC7□□□□□ -1.29
USP11P51784 SNORA70J-201ENST00000384182 135 ntBASIC7□□□□□ -1.29
USP11P51784 SNORD65C-201ENST00000390962 71 ntBASIC7□□□□□ -1.29
USP11P51784 MTCO3P31-201ENST00000405526 789 ntBASIC7□□□□□ -1.29
USP11P51784 RNA5SP156-201ENST00000410250 110 ntBASIC7□□□□□ -1.29
USP11P51784 RNA5SP431-201ENST00000410312 120 ntBASIC7□□□□□ -1.29
USP11P51784 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC7□□□□□ -1.29
USP11P51784 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7□□□□□ -1.29
USP11P51784 AC023128.2-201ENST00000420880 1223 ntBASIC7□□□□□ -1.29
USP11P51784 NME1P1-201ENST00000420914 382 ntBASIC7□□□□□ -1.29
USP11P51784 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC7□□□□□ -1.29
USP11P51784 USP9YP31-201ENST00000431405 881 ntBASIC7□□□□□ -1.29
USP11P51784 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC7□□□□□ -1.29
USP11P51784 LARP1BP3-201ENST00000437229 869 ntBASIC7□□□□□ -1.29
USP11P51784 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC7□□□□□ -1.29
USP11P51784 PPIAP7-201ENST00000454070 489 ntBASIC7□□□□□ -1.29
USP11P51784 AC073594.1-201ENST00000462065 364 ntBASIC7□□□□□ -1.29
USP11P51784 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC7□□□□□ -1.29
USP11P51784 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC7□□□□□ -1.29
USP11P51784 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC7□□□□□ -1.29
USP11P51784 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7□□□□□ -1.29
USP11P51784 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC7□□□□□ -1.29
USP11P51784 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC7□□□□□ -1.29
USP11P51784 AC006499.4-201ENST00000510947 694 ntBASIC7□□□□□ -1.29
USP11P51784 AP000620.1-201ENST00000527147 504 ntBASIC7□□□□□ -1.29
USP11P51784 AC104383.1-201ENST00000530297 370 ntBASIC7□□□□□ -1.29
USP11P51784 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC7□□□□□ -1.29
USP11P51784 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC7□□□□□ -1.29
USP11P51784 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7□□□□□ -1.29
USP11P51784 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7□□□□□ -1.29
USP11P51784 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC7□□□□□ -1.29
USP11P51784 OR6C7P-201ENST00000547875 934 ntBASIC7□□□□□ -1.29
USP11P51784 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7□□□□□ -1.29
USP11P51784 LINC00556-201ENST00000569603 412 ntBASIC7□□□□□ -1.29
USP11P51784 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC7□□□□□ -1.29
USP11P51784 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC7□□□□□ -1.29
USP11P51784 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7□□□□□ -1.29
USP11P51784 GLYATL1P2-202ENST00000588046 902 ntBASIC7□□□□□ -1.29
USP11P51784 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7□□□□□ -1.29
USP11P51784 AC141002.1-201ENST00000607025 279 ntBASIC7□□□□□ -1.29
USP11P51784 AP001437.1-201ENST00000608783 456 ntBASIC7□□□□□ -1.29
USP11P51784 AC090517.2-201ENST00000614966 680 ntBASIC7□□□□□ -1.29
USP11P51784 Six3os1_2.1-201ENST00000616963 217 ntBASIC7□□□□□ -1.29
USP11P51784 FAM27E2-201ENST00000619668 403 ntBASIC7□□□□□ -1.29
USP11P51784 AL356321.1-201ENST00000621360 228 ntBASIC7□□□□□ -1.29
USP11P51784 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
USP11P51784 AC022325.1-201ENST00000502748 2199 ntBASIC7□□□□□ -1.29
USP11P51784 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
USP11P51784 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USP11P51784 ATP8A2P3-201ENST00000426792 1536 ntBASIC7□□□□□ -1.29
USP11P51784 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7□□□□□ -1.29
USP11P51784 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7□□□□□ -1.29
USP11P51784 RPS4XP5-202ENST00000449995 1334 ntBASIC7□□□□□ -1.29
USP11P51784 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
USP11P51784 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
USP11P51784 AC034229.2-201ENST00000566945 2508 ntBASIC6.99□□□□□ -1.29
USP11P51784 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
USP11P51784 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.99□□□□□ -1.29
USP11P51784 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.99□□□□□ -1.29
USP11P51784 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
USP11P51784 CUL4AP1-201ENST00000514750 1863 ntBASIC6.99□□□□□ -1.29
USP11P51784 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USP11P51784 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
USP11P51784 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
USP11P51784 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
USP11P51784 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
USP11P51784 RNU6-1011P-201ENST00000384668 107 ntBASIC6.99□□□□□ -1.29
USP11P51784 OR6C69P-201ENST00000394268 893 ntBASIC6.99□□□□□ -1.29
USP11P51784 AL391422.1-201ENST00000402155 436 ntBASIC6.99□□□□□ -1.29
USP11P51784 VN1R12P-201ENST00000403778 876 ntBASIC6.99□□□□□ -1.29
USP11P51784 HMGN1P14-201ENST00000412459 517 ntBASIC6.99□□□□□ -1.29
USP11P51784 NPM1P4-201ENST00000414095 812 ntBASIC6.99□□□□□ -1.29
USP11P51784 HMGA1P8-201ENST00000414130 321 ntBASIC6.99□□□□□ -1.29
USP11P51784 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.99□□□□□ -1.29
USP11P51784 TCEA1P4-201ENST00000415066 844 ntBASIC6.99□□□□□ -1.29
USP11P51784 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.99□□□□□ -1.29
USP11P51784 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.99□□□□□ -1.29
USP11P51784 RPL34P27-201ENST00000428810 349 ntBASIC6.99□□□□□ -1.29
USP11P51784 AC007679.3-201ENST00000434035 414 ntBASIC6.99□□□□□ -1.29
USP11P51784 PNKDP1-201ENST00000435914 430 ntBASIC6.99□□□□□ -1.29
USP11P51784 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.99□□□□□ -1.29
USP11P51784 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC6.99□□□□□ -1.29
USP11P51784 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.99□□□□□ -1.29
USP11P51784 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC6.99□□□□□ -1.29
USP11P51784 AC009963.3-201ENST00000458090 486 ntBASIC6.99□□□□□ -1.29
USP11P51784 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.99□□□□□ -1.29
USP11P51784 RPL7P1-201ENST00000468161 747 ntBASIC6.99□□□□□ -1.29
USP11P51784 RPL7P9-201ENST00000468715 747 ntBASIC6.99□□□□□ -1.29
USP11P51784 RPL35AP19-201ENST00000469425 329 ntBASIC6.99□□□□□ -1.29
USP11P51784 AC004924.1-201ENST00000480160 781 ntBASIC6.99□□□□□ -1.29
USP11P51784 AC109486.1-201ENST00000486833 374 ntBASIC6.99□□□□□ -1.29
USP11P51784 RN7SL170P-201ENST00000487098 295 ntBASIC6.99□□□□□ -1.29
USP11P51784 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.99□□□□□ -1.29
USP11P51784 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.99□□□□□ -1.29
USP11P51784 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.99□□□□□ -1.29
USP11P51784 AC117522.1-201ENST00000509821 380 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms