Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.85□□□□□ -1.63
RORAP35398 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RORAP35398 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RORAP35398 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RORAP35398 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RORAP35398 AC073136.1-201ENST00000449426 2884 ntBASIC4.85□□□□□ -1.63
RORAP35398 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RORAP35398 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RORAP35398 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RORAP35398 RN7SKP95-201ENST00000362860 303 ntBASIC4.85□□□□□ -1.63
RORAP35398 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RORAP35398 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.85□□□□□ -1.63
RORAP35398 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.85□□□□□ -1.63
RORAP35398 AC104837.2-201ENST00000427236 424 ntBASIC4.85□□□□□ -1.63
RORAP35398 AC009238.2-201ENST00000431026 355 ntBASIC4.85□□□□□ -1.63
RORAP35398 AL138787.1-202ENST00000437804 898 ntBASIC4.85□□□□□ -1.63
RORAP35398 SUMO2P1-206ENST00000445436 284 ntBASIC4.85□□□□□ -1.63
RORAP35398 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.85□□□□□ -1.63
RORAP35398 RPS3AP53-201ENST00000454716 778 ntBASIC4.85□□□□□ -1.63
RORAP35398 snoU13.20-201ENST00000459180 104 ntBASIC4.85□□□□□ -1.63
RORAP35398 AP000942.1-201ENST00000463969 747 ntBASIC4.85□□□□□ -1.63
RORAP35398 COX6B1P5-201ENST00000509843 249 ntBASIC4.85□□□□□ -1.63
RORAP35398 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.85□□□□□ -1.63
RORAP35398 OR7E128P-201ENST00000532736 1024 ntBASIC4.85□□□□□ -1.63
RORAP35398 AC005000.1-201ENST00000536192 288 ntBASIC4.85□□□□□ -1.63
RORAP35398 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.85□□□□□ -1.63
RORAP35398 AC008033.2-201ENST00000542626 177 ntBASIC4.85□□□□□ -1.63
RORAP35398 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RORAP35398 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.85□□□□□ -1.63
RORAP35398 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.85□□□□□ -1.63
RORAP35398 ADAM3B-201ENST00000569937 840 ntBASIC4.85□□□□□ -1.63
RORAP35398 AC011487.3-201ENST00000593607 453 ntBASIC4.85□□□□□ -1.63
RORAP35398 AC087783.2-201ENST00000605070 562 ntBASIC4.85□□□□□ -1.63
RORAP35398 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.85□□□□□ -1.63
RORAP35398 AL136295.6-201ENST00000610486 658 ntBASIC4.85□□□□□ -1.63
RORAP35398 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.85□□□□□ -1.63
RORAP35398 AC100827.5-201ENST00000615883 426 ntBASIC4.85□□□□□ -1.63
RORAP35398 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.85□□□□□ -1.63
RORAP35398 AC091953.3-201ENST00000623220 236 ntBASIC4.85□□□□□ -1.63
RORAP35398 AP002967.1-201ENST00000624203 539 ntBASIC4.85□□□□□ -1.63
RORAP35398 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.85□□□□□ -1.63
RORAP35398 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RORAP35398 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RORAP35398 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RORAP35398 AC083843.3-201ENST00000623679 2186 ntBASIC4.85□□□□□ -1.63
RORAP35398 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RORAP35398 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
RORAP35398 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RORAP35398 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
RORAP35398 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RORAP35398 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.84□□□□□ -1.63
RORAP35398 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RORAP35398 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.84□□□□□ -1.63
RORAP35398 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RORAP35398 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RORAP35398 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RORAP35398 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RORAP35398 RN7SKP103-201ENST00000363848 320 ntBASIC4.84□□□□□ -1.63
RORAP35398 RNA5SP428-201ENST00000365129 132 ntBASIC4.84□□□□□ -1.63
RORAP35398 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.84□□□□□ -1.63
RORAP35398 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RORAP35398 AC104297.1-201ENST00000393779 870 ntBASIC4.84□□□□□ -1.63
RORAP35398 PCNPP4-201ENST00000414817 517 ntBASIC4.84□□□□□ -1.63
RORAP35398 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RORAP35398 AC006466.1-201ENST00000438721 289 ntBASIC4.84□□□□□ -1.63
RORAP35398 AC073648.4-201ENST00000442655 781 ntBASIC4.84□□□□□ -1.63
RORAP35398 BX842559.2-201ENST00000451418 605 ntBASIC4.84□□□□□ -1.63
RORAP35398 AC083982.1-201ENST00000485679 344 ntBASIC4.84□□□□□ -1.63
RORAP35398 AC105233.1-201ENST00000498840 781 ntBASIC4.84□□□□□ -1.63
RORAP35398 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.84□□□□□ -1.63
RORAP35398 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.84□□□□□ -1.63
RORAP35398 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.84□□□□□ -1.63
RORAP35398 MIR4480-201ENST00000582492 71 ntBASIC4.84□□□□□ -1.63
RORAP35398 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.84□□□□□ -1.63
RORAP35398 MEMO1P5-201ENST00000604810 406 ntBASIC4.84□□□□□ -1.63
RORAP35398 AC073342.3-201ENST00000624211 193 ntBASIC4.84□□□□□ -1.63
RORAP35398 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.84□□□□□ -1.63
RORAP35398 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RORAP35398 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.84□□□□□ -1.63
RORAP35398 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
RORAP35398 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
RORAP35398 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
RORAP35398 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
RORAP35398 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.84□□□□□ -1.64
RORAP35398 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
RORAP35398 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.84□□□□□ -1.64
RORAP35398 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RORAP35398 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
RORAP35398 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RORAP35398 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.83□□□□□ -1.64
RORAP35398 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RORAP35398 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
RORAP35398 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RORAP35398 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.83□□□□□ -1.64
RORAP35398 HSPA8P17-201ENST00000427029 1382 ntBASIC4.83□□□□□ -1.64
RORAP35398 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RORAP35398 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RORAP35398 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RORAP35398 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.83□□□□□ -1.64
RORAP35398 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms