Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AL606490.8-201ENST00000441624 319 ntBASIC5.5□□□□□ -1.53
HOXC13P31276 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC13P31276 AC092647.2-201ENST00000452998 253 ntBASIC5.5□□□□□ -1.53
HOXC13P31276 CCDC75P1-201ENST00000469247 791 ntBASIC5.5□□□□□ -1.53
HOXC13P31276 RPSAP51-201ENST00000497462 645 ntBASIC5.5□□□□□ -1.53
HOXC13P31276 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXC13P31276 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXC13P31276 RN7SKP147-201ENST00000517154 244 ntBASIC5.5□□□□□ -1.53
HOXC13P31276 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC13P31276 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXC13P31276 MIR4330-201ENST00000579077 105 ntBASIC5.5□□□□□ -1.53
HOXC13P31276 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXC13P31276 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC13P31276 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC13P31276 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXC13P31276 AC008745.1-201ENST00000604064 271 ntBASIC5.5□□□□□ -1.53
HOXC13P31276 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXC13P31276 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
HOXC13P31276 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC13P31276 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC13P31276 BCORP1-203ENST00000513194 5093 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 AC004817.4-201ENST00000602396 3625 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXC13P31276 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC13P31276 AC126755.2-208ENST00000327792 462 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 AC138969.1-213ENST00000331436 462 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC13P31276 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC13P31276 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC13P31276 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC13P31276 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC13P31276 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC13P31276 RNU6-603P-201ENST00000411403 107 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 FAR2P2-201ENST00000413041 594 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 AL356806.1-201ENST00000422524 916 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 FAR2P4-202ENST00000425399 584 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXC13P31276 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXC13P31276 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC13P31276 TMX2P1-201ENST00000436507 708 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC13P31276 ELOCP10-201ENST00000440624 327 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXC13P31276 AC104634.1-201ENST00000452720 462 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.49□□□□□ -1.53
HOXC13P31276 EIF2S2P4-201ENST00000461070 984 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 RPL5P13-201ENST00000462840 709 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 NPM1P29-201ENST00000483112 803 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 RPS12P31-201ENST00000491419 398 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 AC008897.1-201ENST00000494006 347 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 PCNAP1-201ENST00000505363 709 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXC13P31276 AC022360.1-201ENST00000521058 340 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 BRD9P1-201ENST00000529855 560 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC13P31276 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC13P31276 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC13P31276 BNIP3P1-201ENST00000547295 580 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC13P31276 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HOXC13P31276 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
HOXC13P31276 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXC13P31276 MIR3934-201ENST00000579806 107 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC13P31276 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXC13P31276 ELOCP34-201ENST00000604436 327 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 AC009027.1-201ENST00000604510 479 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 AP004372.1-201ENST00000604842 844 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 AC073111.2-201ENST00000605657 1075 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 AC005021.1-201ENST00000608730 355 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXC13P31276 AC026367.3-201ENST00000619032 590 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 AC090527.3-201ENST00000619041 548 ntBASIC5.49□□□□□ -1.53
HOXC13P31276 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC13P31276 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXC13P31276 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC13P31276 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC13P31276 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HOXC13P31276 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HOXC13P31276 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC13P31276 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC13P31276 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC13P31276 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC13P31276 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC13P31276 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXC13P31276 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC13P31276 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC13P31276 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
HOXC13P31276 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
HOXC13P31276 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC13P31276 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC13P31276 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
HOXC13P31276 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HOXC13P31276 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HOXC13P31276 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXC13P31276 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HOXC13P31276 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HOXC13P31276 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
HOXC13P31276 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HOXC13P31276 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms