Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AL669942.2-201ENST00000620352 697 ntBASIC5.21□□□□□ -1.58
CHMP24386 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.21□□□□□ -1.58
CHMP24386 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.21□□□□□ -1.58
CHMP24386 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.21□□□□□ -1.58
CHMP24386 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CHMP24386 U6.107-201ENST00000637108 79 ntBASIC5.21□□□□□ -1.58
CHMP24386 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP24386 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP24386 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.21□□□□□ -1.58
CHMP24386 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP24386 AL133268.1-201ENST00000405676 1401 ntBASIC5.21□□□□□ -1.58
CHMP24386 GVINP1-202ENST00000531871 7271 ntBASIC5.21□□□□□ -1.58
CHMP24386 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP24386 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP24386 OR4F13P-202ENST00000560066 2054 ntBASIC5.2□□□□□ -1.58
CHMP24386 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CHMP24386 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.2□□□□□ -1.58
CHMP24386 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP24386 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CHMP24386 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP24386 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CHMP24386 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP24386 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.2□□□□□ -1.58
CHMP24386 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.2□□□□□ -1.58
CHMP24386 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CHMP24386 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CHMP24386 RNA5SP46-201ENST00000362370 120 ntBASIC5.2□□□□□ -1.58
CHMP24386 RNA5SP394-201ENST00000364216 119 ntBASIC5.2□□□□□ -1.58
CHMP24386 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.2□□□□□ -1.58
CHMP24386 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CHMP24386 RNU6-354P-201ENST00000383862 107 ntBASIC5.2□□□□□ -1.58
CHMP24386 RNU6-610P-201ENST00000384264 107 ntBASIC5.2□□□□□ -1.58
CHMP24386 MIR130A-201ENST00000385274 89 ntBASIC5.2□□□□□ -1.58
CHMP24386 AL035419.1-201ENST00000397037 564 ntBASIC5.2□□□□□ -1.58
CHMP24386 HMGB1P20-201ENST00000402555 677 ntBASIC5.2□□□□□ -1.58
CHMP24386 AC211486.3-201ENST00000412694 621 ntBASIC5.2□□□□□ -1.58
CHMP24386 SETP15-201ENST00000412724 337 ntBASIC5.2□□□□□ -1.58
CHMP24386 AL357752.1-201ENST00000412817 349 ntBASIC5.2□□□□□ -1.58
CHMP24386 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.2□□□□□ -1.58
CHMP24386 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.2□□□□□ -1.58
CHMP24386 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.2□□□□□ -1.58
CHMP24386 AC009965.2-201ENST00000425328 970 ntBASIC5.2□□□□□ -1.58
CHMP24386 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.2□□□□□ -1.58
CHMP24386 HMGB3P24-201ENST00000433260 622 ntBASIC5.2□□□□□ -1.58
CHMP24386 NDUFB4P8-201ENST00000435351 367 ntBASIC5.2□□□□□ -1.58
CHMP24386 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.2□□□□□ -1.58
CHMP24386 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP24386 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.2□□□□□ -1.58
CHMP24386 MTND2P8-201ENST00000450555 1025 ntBASIC5.2□□□□□ -1.58
CHMP24386 TPMTP4-201ENST00000450749 678 ntBASIC5.2□□□□□ -1.58
CHMP24386 CBX1P2-201ENST00000453841 458 ntBASIC5.2□□□□□ -1.58
CHMP24386 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.2□□□□□ -1.58
CHMP24386 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.2□□□□□ -1.58
CHMP24386 RNU6-615P-201ENST00000516065 106 ntBASIC5.2□□□□□ -1.58
CHMP24386 RNU6-513P-201ENST00000516104 104 ntBASIC5.2□□□□□ -1.58
CHMP24386 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.2□□□□□ -1.58
CHMP24386 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP24386 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP24386 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.2□□□□□ -1.58
CHMP24386 AC018552.3-201ENST00000567416 561 ntBASIC5.2□□□□□ -1.58
CHMP24386 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.2□□□□□ -1.58
CHMP24386 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.2□□□□□ -1.58
CHMP24386 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.2□□□□□ -1.58
CHMP24386 BNIP3P31-201ENST00000604515 566 ntBASIC5.2□□□□□ -1.58
CHMP24386 AC010632.3-201ENST00000611377 369 ntBASIC5.2□□□□□ -1.58
CHMP24386 RNA5SP440-201ENST00000612665 119 ntBASIC5.2□□□□□ -1.58
CHMP24386 AC138907.10-201ENST00000623708 983 ntBASIC5.2□□□□□ -1.58
CHMP24386 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP24386 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP24386 OR2L1P-202ENST00000641567 1023 ntBASIC5.2□□□□□ -1.58
CHMP24386 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CHMP24386 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP24386 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
CHMP24386 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CHMP24386 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.2□□□□□ -1.58
CHMP24386 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP24386 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP24386 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP24386 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP24386 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CHMP24386 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP24386 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
CHMP24386 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP24386 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP24386 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP24386 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.19□□□□□ -1.58
CHMP24386 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.19□□□□□ -1.58
CHMP24386 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP24386 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP24386 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP24386 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP24386 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP24386 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
CHMP24386 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP24386 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP24386 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CHMP24386 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.19□□□□□ -1.58
CHMP24386 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP24386 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.19□□□□□ -1.58
CHMP24386 AC092681.1-201ENST00000297369 291 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms