Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXC6P09630 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXC6P09630 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HOXC6P09630 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXC6P09630 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC6P09630 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC6P09630 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXC6P09630 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC6P09630 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXC6P09630 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC6P09630 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC6P09630 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC6P09630 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXC6P09630 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC6P09630 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC6P09630 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC6P09630 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HOXC6P09630 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC6P09630 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HOXC6P09630 MIR298-201ENST00000401212 88 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 SNORA77-201ENST00000408716 125 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 GTF2IP5-201ENST00000414608 731 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 AL357078.2-201ENST00000416486 427 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 BX510359.2-201ENST00000417920 305 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 SFR1P2-201ENST00000421841 730 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 SETP9-201ENST00000423837 832 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 AL590623.1-201ENST00000427864 105 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 RPS29P9-201ENST00000440360 171 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 RPS15AP29-201ENST00000445539 400 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXC6P09630 OR1H1P-201ENST00000448731 937 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC6P09630 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC6P09630 snoU13.1-201ENST00000459157 104 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 AC104629.1-201ENST00000494226 508 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 HAUS1P1-201ENST00000505275 832 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC6P09630 IGKV2D-10-201ENST00000520194 281 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC6P09630 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC6P09630 AP003049.1-201ENST00000529418 457 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXC6P09630 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC6P09630 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HOXC6P09630 AL049874.4-201ENST00000557593 255 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 OOSP1P2-201ENST00000579644 351 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC6P09630 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.7□□□□□ -1.5
HOXC6P09630 RPL26P30-202ENST00000602923 645 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 AL583832.1-201ENST00000603227 784 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 AC242628.1-201ENST00000606810 391 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 SNORA35B-201ENST00000607417 129 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 AL356490.1-201ENST00000623079 479 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 CR381572.2-201ENST00000624852 397 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC6P09630 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC6P09630 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC6P09630 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HOXC6P09630 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXC6P09630 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC6P09630 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC6P09630 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC6P09630 SAMMSON-210ENST00000641260 1308 ntBASIC5.7□□□□□ -1.5
HOXC6P09630 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC6P09630 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC6P09630 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC6P09630 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXC6P09630 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
HOXC6P09630 AL512283.1-201ENST00000606756 1384 ntBASIC5.69□□□□□ -1.5
HOXC6P09630 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXC6P09630 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC6P09630 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC6P09630 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC6P09630 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXC6P09630 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC6P09630 SNORA70.2-201ENST00000364506 135 ntBASIC5.69□□□□□ -1.5
HOXC6P09630 RNU11-201ENST00000387069 134 ntBASIC5.69□□□□□ -1.5
HOXC6P09630 NPM1P38-201ENST00000403835 865 ntBASIC5.69□□□□□ -1.5
HOXC6P09630 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC6P09630 AC009480.2-201ENST00000422916 432 ntBASIC5.69□□□□□ -1.5
HOXC6P09630 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC6P09630 AC012512.1-201ENST00000446594 718 ntBASIC5.69□□□□□ -1.5
HOXC6P09630 SLC25A18P1-201ENST00000449385 454 ntBASIC5.69□□□□□ -1.5
HOXC6P09630 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXC6P09630 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.69□□□□□ -1.5
HOXC6P09630 RN7SL441P-201ENST00000492388 296 ntBASIC5.69□□□□□ -1.5
HOXC6P09630 IMPA1P1-201ENST00000510718 842 ntBASIC5.69□□□□□ -1.5
HOXC6P09630 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXC6P09630 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC6P09630 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXC6P09630 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXC6P09630 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXC6P09630 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC6P09630 AL360012.1-201ENST00000602813 131 ntBASIC5.69□□□□□ -1.5
HOXC6P09630 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC6P09630 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXC6P09630 BNIP3P41-202ENST00000616656 861 ntBASIC5.69□□□□□ -1.5
HOXC6P09630 MIR6758-201ENST00000620653 63 ntBASIC5.69□□□□□ -1.5
HOXC6P09630 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC6P09630 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms