Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.36□□□□□ -1.55
TPM1P09493 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.36□□□□□ -1.55
TPM1P09493 AC013470.3-201ENST00000420252 1194 ntBASIC5.36□□□□□ -1.55
TPM1P09493 AC004448.2-201ENST00000422360 586 ntBASIC5.36□□□□□ -1.55
TPM1P09493 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.36□□□□□ -1.55
TPM1P09493 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.36□□□□□ -1.55
TPM1P09493 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.36□□□□□ -1.55
TPM1P09493 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TPM1P09493 AC009127.1-201ENST00000467090 155 ntBASIC5.36□□□□□ -1.55
TPM1P09493 RPL7P39-201ENST00000481157 744 ntBASIC5.36□□□□□ -1.55
TPM1P09493 RN7SKP70-201ENST00000516655 271 ntBASIC5.36□□□□□ -1.55
TPM1P09493 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.36□□□□□ -1.55
TPM1P09493 GLRXP2-201ENST00000555594 321 ntBASIC5.36□□□□□ -1.55
TPM1P09493 AC087477.6-201ENST00000559595 843 ntBASIC5.36□□□□□ -1.55
TPM1P09493 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.36□□□□□ -1.55
TPM1P09493 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TPM1P09493 SNORA74C-1-201ENST00000580726 201 ntBASIC5.36□□□□□ -1.55
TPM1P09493 EIF1P5-201ENST00000585002 234 ntBASIC5.36□□□□□ -1.55
TPM1P09493 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.36□□□□□ -1.55
TPM1P09493 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.36□□□□□ -1.55
TPM1P09493 AC004232.3-201ENST00000622977 525 ntBASIC5.36□□□□□ -1.55
TPM1P09493 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TPM1P09493 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.36□□□□□ -1.55
TPM1P09493 CUL4AP1-201ENST00000514750 1863 ntBASIC5.36□□□□□ -1.55
TPM1P09493 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TPM1P09493 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TPM1P09493 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TPM1P09493 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TPM1P09493 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.36□□□□□ -1.55
TPM1P09493 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
TPM1P09493 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.36□□□□□ -1.55
TPM1P09493 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TPM1P09493 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TPM1P09493 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.35□□□□□ -1.55
TPM1P09493 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.35□□□□□ -1.55
TPM1P09493 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.35□□□□□ -1.55
TPM1P09493 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
TPM1P09493 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TPM1P09493 PANDAR-201ENST00000629595 1506 ntBASIC5.35□□□□□ -1.55
TPM1P09493 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TPM1P09493 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TPM1P09493 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TPM1P09493 SNORA17.1-201ENST00000362945 126 ntBASIC5.35□□□□□ -1.55
TPM1P09493 RNU1-83P-201ENST00000363426 164 ntBASIC5.35□□□□□ -1.55
TPM1P09493 RNA5SP28-201ENST00000363841 119 ntBASIC5.35□□□□□ -1.55
TPM1P09493 SNORD96B-201ENST00000386148 79 ntBASIC5.35□□□□□ -1.55
TPM1P09493 HDGFP1-201ENST00000405943 252 ntBASIC5.35□□□□□ -1.55
TPM1P09493 RN7SKP126-201ENST00000411143 300 ntBASIC5.35□□□□□ -1.55
TPM1P09493 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.35□□□□□ -1.55
TPM1P09493 PPIAP13-201ENST00000434706 478 ntBASIC5.35□□□□□ -1.55
TPM1P09493 SCAND3P1-201ENST00000439854 1060 ntBASIC5.35□□□□□ -1.55
TPM1P09493 OR7E125P-201ENST00000443450 846 ntBASIC5.35□□□□□ -1.55
TPM1P09493 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.35□□□□□ -1.55
TPM1P09493 AC073109.1-201ENST00000445066 978 ntBASIC5.35□□□□□ -1.55
TPM1P09493 RPL7L1P1-201ENST00000448259 785 ntBASIC5.35□□□□□ -1.55
TPM1P09493 TCEA1P1-201ENST00000449716 880 ntBASIC5.35□□□□□ -1.55
TPM1P09493 RPS26P41-201ENST00000450370 284 ntBASIC5.35□□□□□ -1.55
TPM1P09493 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.35□□□□□ -1.55
TPM1P09493 AC007386.1-201ENST00000455212 582 ntBASIC5.35□□□□□ -1.55
TPM1P09493 RPS27AP2-201ENST00000457576 465 ntBASIC5.35□□□□□ -1.55
TPM1P09493 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.35□□□□□ -1.55
TPM1P09493 RN7SL41P-201ENST00000476144 297 ntBASIC5.35□□□□□ -1.55
TPM1P09493 AC016687.1-201ENST00000482574 353 ntBASIC5.35□□□□□ -1.55
TPM1P09493 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TPM1P09493 AC005363.1-201ENST00000530779 351 ntBASIC5.35□□□□□ -1.55
TPM1P09493 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.35□□□□□ -1.55
TPM1P09493 AL049779.2-201ENST00000553847 315 ntBASIC5.35□□□□□ -1.55
TPM1P09493 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.35□□□□□ -1.55
TPM1P09493 CD24P2-201ENST00000565486 219 ntBASIC5.35□□□□□ -1.55
TPM1P09493 TVP23CP2-201ENST00000571473 623 ntBASIC5.35□□□□□ -1.55
TPM1P09493 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TPM1P09493 AC095055.1-201ENST00000603472 1113 ntBASIC5.35□□□□□ -1.55
TPM1P09493 AC096553.1-201ENST00000605169 829 ntBASIC5.35□□□□□ -1.55
TPM1P09493 RNA5SP440-201ENST00000612665 119 ntBASIC5.35□□□□□ -1.55
TPM1P09493 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TPM1P09493 LINC00901.1-201ENST00000617252 152 ntBASIC5.35□□□□□ -1.55
TPM1P09493 MIR6837-201ENST00000620884 64 ntBASIC5.35□□□□□ -1.55
TPM1P09493 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.35□□□□□ -1.55
TPM1P09493 AC055839.1-201ENST00000634467 498 ntBASIC5.35□□□□□ -1.55
TPM1P09493 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TPM1P09493 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.35□□□□□ -1.55
TPM1P09493 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TPM1P09493 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TPM1P09493 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TPM1P09493 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TPM1P09493 AC091046.3-201ENST00000631455 1574 ntBASIC5.34□□□□□ -1.55
TPM1P09493 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.34□□□□□ -1.55
TPM1P09493 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
TPM1P09493 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TPM1P09493 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.34□□□□□ -1.55
TPM1P09493 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TPM1P09493 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TPM1P09493 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.34□□□□□ -1.55
TPM1P09493 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
TPM1P09493 RNU6-1263P-201ENST00000384601 106 ntBASIC5.34□□□□□ -1.55
TPM1P09493 RN7SKP293-201ENST00000411389 296 ntBASIC5.34□□□□□ -1.55
TPM1P09493 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TPM1P09493 PDSS1P1-201ENST00000422953 1114 ntBASIC5.34□□□□□ -1.55
TPM1P09493 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.34□□□□□ -1.55
TPM1P09493 RPL7L1P9-201ENST00000431298 745 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms