Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RN7SKP27-201ENST00000410684 333 ntBASIC5.74□□□□□ -1.49
COL1A1P02452 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.74□□□□□ -1.49
COL1A1P02452 VTI1BP4-201ENST00000427516 527 ntBASIC5.74□□□□□ -1.49
COL1A1P02452 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.74□□□□□ -1.49
COL1A1P02452 AL162591.2-201ENST00000449634 317 ntBASIC5.74□□□□□ -1.49
COL1A1P02452 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.74□□□□□ -1.49
COL1A1P02452 AC093840.1-201ENST00000511599 336 ntBASIC5.74□□□□□ -1.49
COL1A1P02452 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.74□□□□□ -1.49
COL1A1P02452 AC068831.4-201ENST00000556118 109 ntBASIC5.74□□□□□ -1.49
COL1A1P02452 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
COL1A1P02452 SNORA74C-1-201ENST00000580726 201 ntBASIC5.74□□□□□ -1.49
COL1A1P02452 BX005214.3-202ENST00000619809 325 ntBASIC5.74□□□□□ -1.49
COL1A1P02452 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
COL1A1P02452 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
COL1A1P02452 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.74□□□□□ -1.49
COL1A1P02452 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
COL1A1P02452 AC025574.1-201ENST00000554784 1653 ntBASIC5.74□□□□□ -1.49
COL1A1P02452 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.74□□□□□ -1.49
COL1A1P02452 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
COL1A1P02452 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.74□□□□□ -1.49
COL1A1P02452 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL1A1P02452 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
COL1A1P02452 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL1A1P02452 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.73□□□□□ -1.49
COL1A1P02452 RNA5SP447-201ENST00000363749 119 ntBASIC5.73□□□□□ -1.49
COL1A1P02452 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
COL1A1P02452 AC140479.3-201ENST00000418944 1126 ntBASIC5.73□□□□□ -1.49
COL1A1P02452 RPL17P36-201ENST00000420302 549 ntBASIC5.73□□□□□ -1.49
COL1A1P02452 RGS17P1-201ENST00000423358 553 ntBASIC5.73□□□□□ -1.49
COL1A1P02452 RPL7AP28-201ENST00000464513 571 ntBASIC5.73□□□□□ -1.49
COL1A1P02452 AC109327.1-201ENST00000471666 403 ntBASIC5.73□□□□□ -1.49
COL1A1P02452 MTND4LP2-201ENST00000502312 285 ntBASIC5.73□□□□□ -1.49
COL1A1P02452 AC015795.1-201ENST00000513669 327 ntBASIC5.73□□□□□ -1.49
COL1A1P02452 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL1A1P02452 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.73□□□□□ -1.49
COL1A1P02452 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.73□□□□□ -1.49
COL1A1P02452 MAPK10-328ENST00000641553 4009 ntBASIC5.73□□□□□ -1.49
COL1A1P02452 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL1A1P02452 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
COL1A1P02452 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL1A1P02452 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.73□□□□□ -1.49
COL1A1P02452 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL1A1P02452 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.73□□□□□ -1.49
COL1A1P02452 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.73□□□□□ -1.49
COL1A1P02452 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.72□□□□□ -1.49
COL1A1P02452 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL1A1P02452 AC073136.1-201ENST00000449426 2884 ntBASIC5.72□□□□□ -1.49
COL1A1P02452 AC108751.5-201ENST00000492880 1336 ntBASIC5.72□□□□□ -1.49
COL1A1P02452 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL1A1P02452 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL1A1P02452 U3.35-201ENST00000408405 208 ntBASIC5.72□□□□□ -1.49
COL1A1P02452 UQCRBP1-201ENST00000421129 336 ntBASIC5.72□□□□□ -1.49
COL1A1P02452 MTND2P28-201ENST00000457540 1044 ntBASIC5.72□□□□□ -1.49
COL1A1P02452 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
COL1A1P02452 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL1A1P02452 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.72□□□□□ -1.49
COL1A1P02452 AP001781.1-201ENST00000530977 207 ntBASIC5.72□□□□□ -1.49
COL1A1P02452 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.72□□□□□ -1.49
COL1A1P02452 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.72□□□□□ -1.49
COL1A1P02452 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.72□□□□□ -1.49
COL1A1P02452 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.72□□□□□ -1.49
COL1A1P02452 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.72□□□□□ -1.49
COL1A1P02452 AL020997.2-201ENST00000602607 184 ntBASIC5.72□□□□□ -1.49
COL1A1P02452 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.72□□□□□ -1.49
COL1A1P02452 AL392048.1-201ENST00000613946 534 ntBASIC5.72□□□□□ -1.49
COL1A1P02452 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.72□□□□□ -1.49
COL1A1P02452 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL1A1P02452 AC004232.3-201ENST00000622977 525 ntBASIC5.72□□□□□ -1.49
COL1A1P02452 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL1A1P02452 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.72□□□□□ -1.49
COL1A1P02452 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL1A1P02452 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL1A1P02452 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL1A1P02452 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
COL1A1P02452 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
COL1A1P02452 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.71□□□□□ -1.49
COL1A1P02452 SNORA57.1-201ENST00000391227 145 ntBASIC5.71□□□□□ -1.49
COL1A1P02452 MIR1193-201ENST00000408109 78 ntBASIC5.71□□□□□ -1.49
COL1A1P02452 AC006065.1-201ENST00000422539 802 ntBASIC5.71□□□□□ -1.49
COL1A1P02452 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.71□□□□□ -1.49
COL1A1P02452 AC092162.1-201ENST00000432828 434 ntBASIC5.71□□□□□ -1.49
COL1A1P02452 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.71□□□□□ -1.49
COL1A1P02452 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.71□□□□□ -1.49
COL1A1P02452 AC073073.1-201ENST00000493920 463 ntBASIC5.71□□□□□ -1.49
COL1A1P02452 Y_RNA.719-201ENST00000517156 106 ntBASIC5.71□□□□□ -1.49
COL1A1P02452 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.71□□□□□ -1.49
COL1A1P02452 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.71□□□□□ -1.49
COL1A1P02452 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.71□□□□□ -1.49
COL1A1P02452 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.71□□□□□ -1.49
COL1A1P02452 AC006349.1-201ENST00000555526 235 ntBASIC5.71□□□□□ -1.49
COL1A1P02452 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.71□□□□□ -1.49
COL1A1P02452 KPNA2P3-201ENST00000584190 848 ntBASIC5.71□□□□□ -1.49
COL1A1P02452 AC115286.1-201ENST00000604298 434 ntBASIC5.71□□□□□ -1.49
COL1A1P02452 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.71□□□□□ -1.49
COL1A1P02452 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
COL1A1P02452 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
COL1A1P02452 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.49
COL1A1P02452 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
COL1A1P02452 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL1A1P02452 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms