Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RN7SKP47-201ENST00000365347 328 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
ALDH1A1P00352 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ALDH1A1P00352 SNORD65-201ENST00000391079 73 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 SNORA17A-201ENST00000391185 133 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 AL122016.1-201ENST00000403365 367 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 AL354719.1-201ENST00000406535 843 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 CYCSP17-201ENST00000407870 315 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
ALDH1A1P00352 RNU4-61P-201ENST00000411243 107 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 JKAMPP1-201ENST00000413804 919 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ALDH1A1P00352 B3GALNT1P1-201ENST00000420569 975 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 AL358176.2-201ENST00000425769 204 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 MTCO1P54-201ENST00000430139 712 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.78□□□□□ -1.16
ALDH1A1P00352 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC7.78□□□□□ -1.16
ALDH1A1P00352 NXT1P1-201ENST00000458481 316 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.78□□□□□ -1.16
ALDH1A1P00352 ZNF519P4-201ENST00000514008 125 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 AC137768.1-201ENST00000549998 553 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC7.78□□□□□ -1.16
ALDH1A1P00352 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.78□□□□□ -1.16
ALDH1A1P00352 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC7.78□□□□□ -1.16
ALDH1A1P00352 AL669831.4-202ENST00000590817 238 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 AC243960.4-201ENST00000600532 288 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 AL035410.2-201ENST00000604963 864 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 AC113139.1-201ENST00000605049 239 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.78□□□□□ -1.16
ALDH1A1P00352 AC090527.3-201ENST00000619041 548 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 AC090971.5-201ENST00000621102 293 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 SNORA17.5-201ENST00000630429 132 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.78□□□□□ -1.16
ALDH1A1P00352 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ALDH1A1P00352 AC138627.1-203ENST00000641872 1680 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ALDH1A1P00352 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
ALDH1A1P00352 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
ALDH1A1P00352 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ALDH1A1P00352 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
ALDH1A1P00352 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.78□□□□□ -1.16
ALDH1A1P00352 AC018765.1-201ENST00000623357 3446 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
ALDH1A1P00352 ANKRD62P1-201ENST00000434304 1623 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC7.78□□□□□ -1.16
ALDH1A1P00352 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.78□□□□□ -1.16
ALDH1A1P00352 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ALDH1A1P00352 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.78□□□□□ -1.16
ALDH1A1P00352 DCAF13P3-201ENST00000561147 1334 ntBASIC7.78□□□□□ -1.16
ALDH1A1P00352 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.77□□□□□ -1.16
ALDH1A1P00352 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.77□□□□□ -1.16
ALDH1A1P00352 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.77□□□□□ -1.16
ALDH1A1P00352 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.17
ALDH1A1P00352 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
ALDH1A1P00352 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
ALDH1A1P00352 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
ALDH1A1P00352 AC091046.3-201ENST00000631455 1574 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
ALDH1A1P00352 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
ALDH1A1P00352 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC7.77□□□□□ -1.17
ALDH1A1P00352 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
ALDH1A1P00352 AL031985.1-201ENST00000392713 418 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 AL121977.1-201ENST00000401636 979 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 AL359694.1-201ENST00000403247 604 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 Y_RNA.598-201ENST00000410480 95 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 RNU6-575P-201ENST00000411326 105 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC7.77□□□□□ -1.17
ALDH1A1P00352 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC7.77□□□□□ -1.17
ALDH1A1P00352 SDCBPP2-201ENST00000424643 885 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 AL356583.2-201ENST00000426536 280 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC7.77□□□□□ -1.17
ALDH1A1P00352 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC7.77□□□□□ -1.17
ALDH1A1P00352 AL365400.1-201ENST00000431854 640 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC7.77□□□□□ -1.17
ALDH1A1P00352 AL358934.1-201ENST00000432346 324 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 NPM1P18-201ENST00000434232 732 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC7.77□□□□□ -1.17
ALDH1A1P00352 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.77□□□□□ -1.17
ALDH1A1P00352 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.77□□□□□ -1.17
ALDH1A1P00352 GAPDHP33-201ENST00000443168 1013 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.77□□□□□ -1.17
ALDH1A1P00352 AC010240.2-201ENST00000445363 1205 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
ALDH1A1P00352 COX4I1P2-201ENST00000447446 547 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 RGS5-217ENST00000451759 835 ntTSL 3 BASIC7.77□□□□□ -1.17
ALDH1A1P00352 MTND1P9-201ENST00000453775 944 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 AP002453.1-201ENST00000492327 668 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 AC093278.1-201ENST00000494700 600 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.77□□□□□ -1.17
ALDH1A1P00352 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.77□□□□□ -1.17
ALDH1A1P00352 AC146944.3-201ENST00000509969 371 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 RNU6-1281P-201ENST00000516223 105 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 AC027308.1-201ENST00000517993 110 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC7.77□□□□□ -1.17
ALDH1A1P00352 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.77□□□□□ -1.17
ALDH1A1P00352 AC243972.3-201ENST00000539655 198 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.77□□□□□ -1.17
ALDH1A1P00352 AC010653.1-201ENST00000571108 881 ntBASIC7.77□□□□□ -1.17
ALDH1A1P00352 AC100830.2-201ENST00000581636 240 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms